RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ABCD3P28288 659 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 CTBP2P56545 445 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 MVKQ03426 396 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 EIF3IQ13347 325 aaKnown RBP17.86■□□□□ 0.45
RPAIN-210ENST00000571613 TUBA3CQ13748 450 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 GINS1Q14691 196 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 MEDAGQ5VYS4 303 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 FOXB2Q5VYV0 432 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 TMEM236Q5W0B7 351 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 PRSS48Q7RTY5 328 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 SLCO6A1Q86UG4 719 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 SLC43A2Q8N370 569 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 SLC38A2Q96QD8 506 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 LMF1Q96S06 567 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 POLDIP3Q9BY77 421 aaKnown RBP17.86■□□□□ 0.45
RPAIN-210ENST00000571613 LAT2Q9GZY6 243 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 C11orf16Q9NQ32 467 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 CNIH4Q9P003 139 aa17.86■□□□□ 0.45
RPAIN-210ENST00000571613 LOC102723996A0A087X1L8 192 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 IGHV3-20A0A0C4DH32 117 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 CLCA1A8K7I4 914 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 ALG1L2C9J202 215 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 CNOT3O75175 753 aaKnown RBP17.85■□□□□ 0.45
RPAIN-210ENST00000571613 ZFAND5O76080 213 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 IGHEP01854 428 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 TMEM201Q5SNT2 666 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 SLC25A30Q5SVS4 291 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 WBP2NLQ6ICG8 309 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 LCN10Q6JVE6 187 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 TMPRSS11FQ6ZWK6 438 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 NLGN4XQ8N0W4 816 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 TAAR9Q96RI9 348 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 PRRX2Q99811 253 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 WDR77Q9BQA1 342 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-210ENST00000571613 ZNF426Q9BUY5 554 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 DDA1Q9BW61 102 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 CCDC90BQ9GZT6 254 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 RYDENQ9NUL5 291 aaKnown RBP17.85■□□□□ 0.45
RPAIN-210ENST00000571613 FLRT3Q9NZU0 649 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 ZNF223Q9UK11 482 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-210ENST00000571613 CDH10Q9Y6N8 788 aa17.85■□□□□ 0.45
RPAIN-210ENST00000571613 RALGAPA1Q6GYQ0 2036 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 MUC3AQ02505 3323 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 EIF4E2O60573 245 aaKnown RBP17.84■□□□□ 0.45
RPAIN-210ENST00000571613 ITIH1P19827 911 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 RNF144AP50876 292 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-210ENST00000571613 SLC26A5P58743 744 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 LSM11P83369 360 aaKnown RBP eCLIP17.84■□□□□ 0.45
RPAIN-210ENST00000571613 INSM1Q01101 510 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-210ENST00000571613 NCF4Q15080 339 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 CSRP2Q16527 193 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 ISXQ2M1V0 245 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 CDCP2Q5VXM1 449 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 FAM198BQ6UWH4 519 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 RAB11FIP2Q7L804 512 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 MRGPREQ86SM8 312 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 MISPQ8IVT2 679 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 CCDC103Q8IW40 242 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 CADM2Q8N3J6 435 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 POGLUT1Q8NBL1 392 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 GRHL3Q8TE85 626 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 RNF31Q96EP0 1072 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 TBL1XR1Q9BZK7 514 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 NRSN2Q9GZP1 204 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 RBM38Q9H0Z9 239 aaKnown RBP17.84■□□□□ 0.45
RPAIN-210ENST00000571613 CNOT2Q9NZN8 540 aaKnown RBP17.84■□□□□ 0.45
RPAIN-210ENST00000571613 PSORS1C1Q9UIG5 152 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 TTC28Q96AY4 2481 aa17.84■□□□□ 0.45
RPAIN-210ENST00000571613 EFCAB10A6NFE3 127 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 CCDC160A6NGH7 325 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 UNC119BA6NIH7 251 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 SNTNA6NMZ2 147 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 ZNF701M0R085 212 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-210ENST00000571613 FOXD2O60548 495 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-210ENST00000571613 ICOSLGO75144 302 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 RCBTB2O95199 551 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 PNMTP11086 282 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 IFI30P13284 250 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 GPR4P46093 362 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 PCYT1AP49585 367 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 SKP2Q13309 424 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 OCLNQ16625 522 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 SMN1Q16637 294 aaKnown RBP17.83■□□□□ 0.45
RPAIN-210ENST00000571613 LINC00114Q6XXX2 140 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 ZNF620Q6ZNG0 422 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 CYP4Z2PQ8N1L4 340 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 FAM26EQ8N5C1 309 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 BPIFA2Q96DR5 249 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 COPS4Q9BT78 406 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 SLC19A3Q9BZV2 496 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 C12orf10Q9HB07 376 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 TBC1D23Q9NUY8 699 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 MED17Q9NVC6 651 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 PAK1IP1Q9NWT1 392 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-210ENST00000571613 NPFFR2Q9Y5X5 522 aa17.83■□□□□ 0.45
RPAIN-210ENST00000571613 CDC14CA4D256 554 aa17.83■□□□□ 0.44
RPAIN-210ENST00000571613 NDUFB5O43674 189 aa17.83■□□□□ 0.44
RPAIN-210ENST00000571613 PPM1BO75688 479 aa17.83■□□□□ 0.44
RPAIN-210ENST00000571613 HMGN1P05114 100 aa17.83■□□□□ 0.44
RPAIN-210ENST00000571613 HTR1AP08908 422 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms