RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HSD17B8Q92506 261 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 CDKL2Q92772 493 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 N4BP2L2Q92802 583 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 KIAA1143Q96AT1 154 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 RAD51AP1Q96B01 352 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 MTERF3Q96E29 417 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 FAM120BQ96EK7 910 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 SAT2Q96F10 170 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 EBNA1BP2Q99848 306 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 ERP44Q9BS26 406 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 P2RY12Q9H244 342 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 OR52A5Q9H2C5 316 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 KCNK15Q9H427 330 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 FANCEQ9HB96 536 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ACKR4Q9NPB9 350 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ASCL3Q9NQ33 180 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ZNF71Q9NQZ8 489 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 FAM114A2Q9NRY5 505 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 NSMCE4AQ9NXX6 385 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 UTP6Q9NYH9 597 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 TXNDC16Q9P2K2 825 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 PISDQ9UG56 409 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 PRDM4Q9UKN5 801 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 RARRES3Q9UL19 164 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 PLAGL1Q9UM63 463 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 TDRKHQ9Y2W6 561 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 SPIN1Q9Y657 262 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 TDRD6O60522 2096 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 DMXL2Q8TDJ6 3036 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 TP53BP1Q12888 1972 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 IGKV3D-15A0A087WSY6 115 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 IGLV9-49A0A0B4J1Y8 123 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 A0A1W2PRB8 838 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 SLC5A10A0PJK1 596 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CTAGE15A4D2H0 777 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 GOLGA8KD6RF30 607 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 E9PI62 339 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 GOLGA8TH3BQL2 631 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PLOD2O00469 737 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 EIF3HO15372 352 aaKnown RBP eCLIP3.53□□□□□ -1.84
NUP88-202ENST00000570937 SPAG6O75602 509 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CATP04040 527 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 KLK3P07288 261 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 HBQ1P09105 142 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 GSTA2P09210 222 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 HIST1H2AGP0C0S8 130 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 CCL4P13236 92 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 NELFEP18615 380 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 CD9P21926 228 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PDHA2P29803 388 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PRDX3P30048 256 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 CCR7P32248 378 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CA5AP35218 305 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 WNT5AP41221 380 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 LEPRP48357 1165 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 RGS4P49798 205 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 RAB28P51157 221 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CSE1LP55060 971 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 SIRPAP78324 504 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 KCNJ10P78508 379 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 MC1RQ01726 317 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 ABRQ12979 859 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PDIA2Q13087 525 aaKnown RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 PLA2G7Q13093 441 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PRKG2Q13237 762 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 ARHGAP19Q14CB8 494 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 C16orf72Q14CZ0 275 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 ZNF658BQ4V348 819 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 HSP90AA5PQ58FG0 334 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 C8orf74Q6P047 294 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CES3Q6UWW8 571 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CYS1Q717R9 158 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 LDB1Q86U70 411 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 CTAGE6Q86UF2 777 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 KCNMB4Q86W47 210 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 ZBED8Q8IZ13 594 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PPFIBP2Q8ND30 876 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 OR52E1Q8NGJ3 308 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CFAP61Q8NHU2 1237 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 PYROXD1Q8WU10 500 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 LPGAT1Q92604 370 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 ART4Q93070 314 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 GIMAP5Q96F15 307 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CFAP36Q96G28 342 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 VPS39Q96JC1 886 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 RMDN2Q96LZ7 410 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 C16orf45Q96MC5 204 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 BIRC8Q96P09 236 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 OR6C1Q96RD1 312 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CCNL2Q96S94 520 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 ULBP3Q9BZM4 244 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 FAM129AQ9BZQ8 928 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 SLC7A5P2Q9GIP4 190 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 EGLN1Q9GZT9 426 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 CHMP1AQ9HD42 196 aaPredicted RBP3.53□□□□□ -1.84
NUP88-202ENST00000570937 SOHLH2Q9NX45 425 aa3.53□□□□□ -1.84
NUP88-202ENST00000570937 TAS2R13Q9NYV9 303 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms