RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PCOLCEQ15113 449 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZNHIT3Q15649 155 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 CHI3L2Q15782 390 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZNF77Q15935 545 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 RBBP7Q16576 425 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GUK1Q16774 197 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 DUSP6Q16828 381 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TRIM16LQ309B1 348 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ITPRIPL2Q3MIP1 535 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMEM35AQ53FP2 167 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 LY6G5CQ5SRR4 150 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GPR107Q5VW38 600 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMEM215Q68D42 235 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZNF549Q6P9A3 640 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GDPD4Q6W3E5 623 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TIFABQ6ZNK6 161 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 RFLNAQ6ZTI6 216 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 LHFPL4Q7Z7J7 247 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SETD3Q86TU7 594 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 SLCO6A1Q86UG4 719 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PIM3Q86V86 326 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZC3HC1Q86WB0 502 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMPRSS6Q8IU80 811 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CILP2Q8IUL8 1156 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMEM126BQ8IUX1 230 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SHISA5Q8N114 240 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GABRG1Q8N1C3 465 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ELMOD1Q8N336 334 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CPXM2Q8N436 756 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FITM2Q8N6M3 262 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 KYQ8NBH2 561 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PDPRQ8NCN5 879 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 C2CD4AQ8NCU7 369 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 DDHD1Q8NEL9 900 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 OR5M8Q8NGP6 311 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FAM110DQ8TAY7 271 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 M1APQ8TC57 530 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 UBASH3BQ8TF42 649 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 UBTD2Q8WUN7 234 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SNX33Q8WV41 574 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 RNF141Q8WVD5 230 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 C10orf82Q8WW14 230 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 DNAJC9Q8WXX5 260 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 AP3S1Q92572 193 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 AKAP1Q92667 903 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMG6-208ENST00000570874 SMARCD2Q92925 531 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 BORCS5Q969J3 196 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CPNE4Q96A23 557 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 ARRDC3Q96B67 414 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FAM136AQ96C01 138 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FOXRED1Q96CU9 486 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 REPS1Q96D71 796 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TOE1Q96GM8 510 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 COQ2Q96H96 371 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PACRGQ96M98 296 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 TECTBQ96PL2 329 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 RAB40CQ96S21 281 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 MTERF1Q99551 399 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 CMKLR1Q99788 373 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CPNE1Q99829 537 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 MAPKAP1Q9BPZ7 522 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 BTBD10Q9BSF8 475 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SRRQ9GZT4 340 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CTDSP1Q9GZU7 261 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CLPBQ9H078 707 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ALX4Q9H161 411 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 METTL9Q9H1A3 318 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ELOVL6Q9H5J4 265 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 MTHFD2LQ9H903 347 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 MYOZ1Q9NP98 299 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZDHHC4Q9NPG8 344 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 C20orf141Q9NUB4 165 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 MYEF2Q9P2K5 600 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 GALPQ9UBC7 116 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PEMTQ9UBM1 199 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 EIF3KQ9UBQ5 218 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZNF639Q9UID6 485 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FBXO5Q9UKT4 447 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 IKZF3Q9UKT9 509 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 WASF3Q9UPY6 502 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ASB1Q9Y576 335 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 RAI2Q9Y5P3 530 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GMPPBQ9Y5P6 360 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FKBP7Q9Y680 259 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 URGCP-MRPS24S4R325 110 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 LAMA3Q16787 3333 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PI4KAP42356 2102 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 TNRC6BQ9UPQ9 1833 aaKnown RBP3.29□□□□□ -1.88
SMG6-208ENST00000570874 CDH23Q9H251 3354 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 A0A096LPK6 155 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 FITM1A5D6W6 292 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 NPEPPSL1A6NEC2 478 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 WIPF3A6NGB9 483 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 AGAP5A6NIR3 686 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 OR2AT4A6NND4 320 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 G3V2L1 256 aa3.29□□□□□ -1.88
SMG6-208ENST00000570874 SGK494L7N484 410 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms