RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 EDARQ9UNE0 448 aa12.36□□□□□ -0.43
GTF3C1-211ENST00000569653 SNX8Q9Y5X2 465 aa12.36□□□□□ -0.43
GTF3C1-211ENST00000569653 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 TMEM120BA0PK00 339 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 SCDO00767 359 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 G6PDP11413 515 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 EDNRAP25101 427 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 LCN1P31025 176 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 SFTPDP35247 375 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 KCNJ5P48544 419 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 CCT3P49368 545 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ZNF41P51814 821 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 HBA1P69905 142 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 TP53BP2Q13625 1128 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ACKR1Q16570 336 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ZNF239Q16600 458 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 DCST2Q5T1A1 773 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 HBMQ6B0K9 141 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ESPNLQ6ZVH7 1005 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 HDXQ7Z353 690 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 CLECL1Q8IZS7 167 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 OR5P2Q8WZ92 322 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 OSTF1Q92882 214 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 C18orf12Q96KH6 178 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 KLHL15Q96M94 604 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 PIP5K1AQ99755 562 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 PAIP2Q9BPZ3 127 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ACTRT3Q9BYD9 372 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ZNF226Q9NYT6 803 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 ING1Q9UK53 422 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 CARD8Q9Y2G2 431 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 RAP2CQ9Y3L5 183 aa12.35□□□□□ -0.43
GTF3C1-211ENST00000569653 BCAS1O75363 584 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 INHBBP09529 407 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 BGNP21810 368 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 SLC1A6P48664 564 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 SLC18A1P54219 525 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 C21orf58P58505 322 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 MAGOHP61326 146 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 PHC1P78364 1004 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 PLAURQ03405 335 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 FGFBP1Q14512 234 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 SEZ6L2Q6UXD5 910 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 NUFIP2Q7Z417 695 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 ATG4DQ86TL0 474 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 LILRA2Q8N149 483 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 FNDC5Q8NAU1 212 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 FBXO27Q8NI29 283 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 PHOSPHO1Q8TCT1 267 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 GPR119Q8TDV5 335 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 COX4I2Q96KJ9 171 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 OR7D2Q96RA2 312 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 C12orf49Q9H741 205 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
GTF3C1-211ENST00000569653 PLCE1Q9P212 2302 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 TRIM64A6NGJ6 449 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 TRIM64BA6NI03 449 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 FCMRO60667 390 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 SCN2BO60939 215 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 GCM2O75603 506 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 H6PDO95479 791 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 PRKCAP17252 672 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 RPL3P39023 403 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 CASP9P55211 416 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 LTBQ06643 244 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 MAD2L1Q13257 205 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 STX3Q13277 289 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 PDCD2Q16342 344 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 TTMPQ5BVD1 217 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 SHEQ5VZ18 495 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 TFAP2EQ6VUC0 442 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 BIVMQ86UB2 503 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 MISPQ8IVT2 679 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 GABRG1Q8N1C3 465 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF781Q8N8C0 355 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 OR56A1Q8NGH5 318 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 SFXN5Q8TD22 340 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 TUBGCP3Q96CW5 907 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 PERPQ96FX8 193 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 PPP1R36Q96LQ0 422 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 SDF2Q99470 211 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 SORT1Q99523 831 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 TMEM204Q9BSN7 226 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 DUSP26Q9BV47 211 aa12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-211ENST00000569653 CR1P17927 2039 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 IGHV3-15A0A0B4J1V0 119 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 A0A1W2PNR3 127 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ETV2O00321 342 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF195O14628 629 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms