RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SMYD1Q8NB12 490 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 ZFP62Q8NB50 900 aaPredicted RBP14.61□□□□□ -0.07
USB1-215ENST00000569252 FAM156AQ8NDB6 213 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 RNF138Q8WVD3 245 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 PROX1Q92786 737 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 FRMD6Q96NE9 622 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 TTTY12Q9BZ98 90 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 LAT2Q9GZY6 243 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 PROK2Q9HC23 129 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 MED11Q9P086 117 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 DKKL1Q9UK85 242 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 SNX13Q9Y5W8 968 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 ABCA12Q86UK0 2595 aa14.61□□□□□ -0.07
USB1-215ENST00000569252 GMFGO60234 142 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 PDE5AO76074 875 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 MFN2O95140 757 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 ZNF682O95780 498 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 RPS4Y1P22090 263 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 MSX2P35548 267 aaPredicted RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 RFC3P40938 356 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 P2RX1P51575 399 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 ZNF41P51814 821 aaPredicted RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 DSCR4P56555 118 aaPredicted RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 PCBP3P57721 371 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 COPZ1P61923 177 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 CEACAM7Q14002 265 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 TRIM25Q14258 630 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 GANABQ14697 944 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 ZSCAN26Q16670 478 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 MRPL2Q5T653 305 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 RNF220Q5VTB9 566 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 YTHDF3Q7Z739 585 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 DHFR2Q86XF0 187 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 CISD2Q8N5K1 135 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 WDSUB1Q8N9V3 476 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 Q8NA96 180 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 GALNT11Q8NCW6 608 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 ZNF563Q8TA94 476 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 POP5Q969H6 163 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 TPD52L3Q96J77 140 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 NSMCE2Q96MF7 247 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 RNF145Q96MT1 663 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 TRIM15Q9C019 465 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 LRMDAQ9H2I8 198 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 LDAHQ9H6V9 325 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 GORASP2Q9H8Y8 452 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 KCNE5Q9UJ90 142 aa14.6□□□□□ -0.07
USB1-215ENST00000569252 SAMD4AQ9UPU9 718 aaKnown RBP14.6□□□□□ -0.07
USB1-215ENST00000569252 A0A087WZY1 265 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 A0A0G2JMM0 328 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 A0A1W2PPB8 328 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 A0A1W2PRS3 328 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 CDHR4A6H8M9 788 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 FAM166BA8MTA8 275 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 KIR3DP1A8MWS1 328 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 CIB2O75838 187 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 SORBS2O94875 1100 aaKnown RBP14.59□□□□□ -0.07
USB1-215ENST00000569252 SERPINA1P01009 418 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 OPN1SWP03999 348 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 C8BP07358 591 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 LINGO3P0C6S8 592 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 NCK1P16333 377 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 PGCP20142 388 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 SUMO3P55854 103 aaPredicted RBP14.59□□□□□ -0.07
USB1-215ENST00000569252 NCALDP61601 193 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 SELENOWP63302 87 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 CD226Q15762 336 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 CYBRD1Q53TN4 286 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 DHRS4L2Q6PKH6 230 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 ZNF836Q6ZNA1 936 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 FKBP9P1Q75LS8 142 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 EID3Q8N140 333 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 FAM109AQ8N4B1 249 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 OR5W2Q8NH69 310 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 PRR7Q8TB68 274 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 TMEM234Q8WY98 164 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 CCDC124Q96CT7 223 aaKnown RBP14.59□□□□□ -0.07
USB1-215ENST00000569252 CLPTM1LQ96KA5 538 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 CADM1Q9BY67 442 aaKnown RBP14.59□□□□□ -0.07
USB1-215ENST00000569252 PCDHAC1Q9H158 963 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 EXO5Q9H790 373 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 EXOSC3Q9NQT5 275 aaKnown RBP14.59□□□□□ -0.07
USB1-215ENST00000569252 RLIMQ9NVW2 624 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 QPCTLQ9NXS2 382 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 GMPR2Q9P2T1 348 aaKnown RBP14.59□□□□□ -0.07
USB1-215ENST00000569252 PRDM4Q9UKN5 801 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 SLC9A8Q9Y2E8 581 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 C15orf41Q9Y2V0 281 aa14.59□□□□□ -0.07
USB1-215ENST00000569252 IGLV3-32A0A0A0MS00 114 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 PINLYPA6NC86 204 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 ANKUB1A6NFN9 424 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 CFAP73A6NFT4 308 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 CLDN24A6NM45 220 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 CDC40O60508 579 aaKnown RBP eCLIP14.58□□□□□ -0.08
USB1-215ENST00000569252 DPP4P27487 766 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 RYKP34925 604 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 KCNJ5P48544 419 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 EEF1A1P68104 462 aaKnown RBP14.58□□□□□ -0.08
USB1-215ENST00000569252 PMP22Q01453 160 aa14.58□□□□□ -0.08
USB1-215ENST00000569252 ZNF117Q03924 483 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms