RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 NUDT14O95848 222 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 IMPDH1P20839 514 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 SERPINB9P50453 376 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 PSMD4P55036 377 aaKnown RBP13.11□□□□□ -0.31
USB1-214ENST00000568848 LCP2Q13094 533 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 IMPG1Q17R60 797 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 NOXRED1Q6NXP6 359 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 CLEC2AQ6UVW9 174 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 TRABD2AQ86V40 505 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 FAM110BQ8TC76 370 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 PHOSPHO1Q8TCT1 267 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 HOXB13Q92826 284 aaPredicted RBP13.11□□□□□ -0.31
USB1-214ENST00000568848 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 C1orf159Q96HA4 380 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 CDC42EP3Q9UKI2 254 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 GRID1Q9ULK0 1009 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
USB1-214ENST00000568848 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
USB1-214ENST00000568848 PRKD3O94806 890 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 YES1P07947 543 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 PRKAA2P54646 552 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 CLEC6AQ6EIG7 209 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
USB1-214ENST00000568848 COX18Q8N8Q8 333 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 OR2T11Q8NH01 316 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 ZFP90Q8TF47 636 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 ZNF75CPQ92670 426 aaPredicted RBP13.1□□□□□ -0.31
USB1-214ENST00000568848 REXO5Q96IC2 774 aaKnown RBP13.1□□□□□ -0.31
USB1-214ENST00000568848 TSSK3Q96PN8 268 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 HDHD5Q9BXW7 423 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 C3orf14Q9HBI5 128 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 LRTM1Q9HBL6 345 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 PAQR5Q9NXK6 330 aaPredicted RBP13.1□□□□□ -0.31
USB1-214ENST00000568848 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 STOML1Q9UBI4 398 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 GIMAP2Q9UG22 337 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 EMCNQ9ULC0 261 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 FIS1Q9Y3D6 152 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 TRAF6Q9Y4K3 522 aa13.1□□□□□ -0.31
USB1-214ENST00000568848 CENPVL1A0A0U1RR11 272 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 EXOC1LA0A1B0GW35 172 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 SCDO00767 359 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 WIPF1O43516 503 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 ENO1P06733 434 aaKnown RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 TAC1P20366 129 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 ATP5F1P24539 256 aaPredicted RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 TTKP33981 857 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 NTF4P34130 210 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 OR3A2P47893 321 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 VLDLRP98155 873 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 RNPS1Q15287 305 aaKnown RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 PDSS1Q5T2R2 415 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 CDC73Q6P1J9 531 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 LRIG3Q6UXM1 1119 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 ACTRT2Q8TDY3 377 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 CPNE4Q96A23 557 aaPredicted RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 L3HYPDHQ96EM0 354 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 SOX7Q9BT81 388 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 SHARPINQ9H0F6 387 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 BARX1Q9HBU1 254 aaPredicted RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 NGBQ9NPG2 151 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 SIRT3Q9NTG7 399 aaPredicted RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 SIRT5Q9NXA8 310 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 CCL27Q9Y4X3 112 aa13.09□□□□□ -0.31
USB1-214ENST00000568848 NUP214P35658 2090 aaPredicted RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
USB1-214ENST00000568848 ARFGEF3Q5TH69 2177 aa13.08□□□□□ -0.31
USB1-214ENST00000568848 M0R1B8 84 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 RIPK2O43353 540 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 SNRPAP09012 282 aaKnown RBP13.08□□□□□ -0.32
USB1-214ENST00000568848 HPGDP15428 266 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 PRKCAP17252 672 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 CCR4P51679 360 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 PKNOX1P55347 436 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 LOXL1Q08397 574 aaPredicted RBP13.08□□□□□ -0.32
USB1-214ENST00000568848 GGTLC2Q14390 218 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 LASP1Q14847 261 aaKnown RBP13.08□□□□□ -0.32
USB1-214ENST00000568848 KIAA0040Q15053 153 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 AGAP6Q5VW22 663 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 GTF2IRD2BQ6EKJ0 949 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 SLC22A25Q6T423 547 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 DNAJC14Q6Y2X3 702 aaPredicted RBP13.08□□□□□ -0.32
USB1-214ENST00000568848 Q6ZSR9 355 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 Q6ZT83 130 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 TRMT10CQ7L0Y3 403 aaKnown RBP13.08□□□□□ -0.32
USB1-214ENST00000568848 GTF2IRD2Q86UP8 949 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 TDRPQ86YL5 185 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 TMCO5AQ8N6Q1 288 aa13.08□□□□□ -0.32
USB1-214ENST00000568848 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
USB1-214ENST00000568848 CDRT4Q8N9R6 151 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms