RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	CNOT9	Q92600	299 aa	Known RBP	13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	POP5	Q969H6	163 aa	Known RBP	13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ZBTB8A	Q96BR9	441 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ARSG	Q96EG1	525 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	C1GALT1C1	Q96EU7	318 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GPR137	Q96N19	417 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	UBQLN3	Q9H347	655 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ZDHHC11	Q9H8X9	412 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GORASP2	Q9H8Y8	452 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ASF1B	Q9NVP2	202 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	DNAJB12	Q9NXW2	375 aa	Known RBP	13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	PACSIN3	Q9UKS6	424 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ICAM5	Q9UMF0	924 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SLC9A8	Q9Y2E8	581 aa		13.55	□□□□□ -0.24
KLHDC4-223	ENST00000568499	EXPH5	Q8NEV8	1989 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	TRGV5	A0A0B4J1U4	118 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	CLDN24	A6NM45	220 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	LINC01387	J3KSC0	135 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ADAM10	O14672	748 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GSC2	O15499	205 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	OPN1SW	P03999	348 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	EDN3	P14138	238 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RYK	P34925	604 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	KCNJ5	P48544	419 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	MLLT10	P55197	1068 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RBPJ	Q06330	500 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	DMTN	Q08495	405 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	CEACAM7	Q14002	265 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	TRIM25	Q14258	630 aa	Known RBP	13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	NDUFAF6	Q330K2	333 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	CYBRD1	Q53TN4	286 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RNFT1	Q5M7Z0	435 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RAET1L	Q5VY80	246 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	CBLN3	Q6UW01	205 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	PRICKLE2	Q7Z3G6	844 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	EID3	Q8N140	333 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GHDC	Q8N2G8	530 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	CLIP4	Q8N3C7	705 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	FAM156A	Q8NDB6	213 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ST8SIA1	Q92185	356 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	TAMM41	Q96BW9	452 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	TPD52L3	Q96J77	140 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	LRGUK	Q96M69	825 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	NSMCE2	Q96MF7	247 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	PIGQ	Q9BRB3	760 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	TRIM15	Q9C019	465 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	OR2B2	Q9GZK3	357 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RLIM	Q9NVW2	624 aa		13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SAMD4A	Q9UPU9	718 aa	Known RBP	13.54	□□□□□ -0.24
KLHDC4-223	ENST00000568499	NBEA	Q8NFP9	2946 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SUSD5	O60279	629 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GCM2	O75603	506 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	PDE5A	O76074	875 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ZNF682	O95780	498 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	LGI1	O95970	557 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SERPINA1	P01009	418 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	FES	P07332	822 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GP1BB	P13224	206 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	NCK1	P16333	377 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	HTR3A	P46098	478 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RGS8	P57771	180 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SELENOW	P63302	87 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	C19orf57	Q0VDD7	668 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	DUSP7	Q16829	419 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	CMPK2	Q5EBM0	449 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	MTX3	Q5HYI7	312 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ARHGAP11A	Q6P4F7	1023 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	FKBP9P1	Q75LS8	142 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	YRDC	Q86U90	279 aa	Known RBP	13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	DHFR2	Q86XF0	187 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SIAH3	Q8IW03	269 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ZNF843	Q8N446	348 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GPR119	Q8TDV5	335 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SFXN2	Q96NB2	322 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	BARD1	Q99728	777 aa	Known RBP	13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	LRMDA	Q9H2I8	198 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	MED17	Q9NVC6	651 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	SELENON	Q9NZV5	590 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ACTR3B	Q9P1U1	418 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	GMPR2	Q9P2T1	348 aa	Known RBP	13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	RPS6KB2	Q9UBS0	482 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	VDAC3	Q9Y277	283 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	NTNG1	Q9Y2I2	539 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	ATRX	P46100	2492 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	IGSF10	Q6WRI0	2623 aa		13.53	□□□□□ -0.24
KLHDC4-223	ENST00000568499	C17orf51	A8MQB3	221 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FAAH	O00519	579 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	AP3D1	O14617	1153 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ARPC2	O15144	300 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OIP5	O43482	229 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TPST1	O60507	370 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ACTL6A	O96019	429 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	IGHG3	P01860	377 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GKN3P	P0CG01	181 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF17	P17021	662 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MST1	P26927	711 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms