RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
MSLN-207ENST00000566549 MUTYHQ9UIF7 546 aa17.3■□□□□ 0.36
MSLN-207ENST00000566549 A0A0C4DFX4 3053 aa17.3■□□□□ 0.36
MSLN-207ENST00000566549 IGHV1OR15-9A0A0B4J2B8 117 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 A0A1B0GWA3 101 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 SNX4O95219 450 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 PAICSP22234 425 aaKnown RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 GABRA5P31644 462 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 BMP8BP34820 402 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 EIF2B2P49770 351 aaKnown RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 PRTGQ2VWP7 1150 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 QSOX2Q6ZRP7 698 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 SPATC1Q76KD6 591 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 SYT13Q7L8C5 426 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 BMP8AQ7Z5Y6 402 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 CLDN22Q8N7P3 220 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 SMAP2Q8WU79 429 aaPredicted RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 MMABQ96EY8 250 aaPredicted RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 TGM7Q96PF1 710 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 ZNF649Q9BS31 505 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 OR51V1Q9H2C8 321 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 MARCH7Q9H992 704 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 SOHLH2Q9NX45 425 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 CMAHPQ9Y471 501 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 V9GYH0 126 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 C12orf71A8MTZ7 269 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 SDC3O75056 442 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 REM1O75628 298 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 IL1AP01583 271 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 PROS1P07225 676 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 MRPL3P09001 348 aaKnown RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 GLULP15104 373 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 NIPAL3Q6P499 406 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 NPSR1Q6W5P4 371 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 GDPD3Q7L5L3 318 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 RBM12BQ8IXT5 1001 aaKnown RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 RNF113BQ8IZP6 322 aaKnown RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 CYB561A3Q8NBI2 242 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 KATNB1Q9BVA0 655 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 CPNE5Q9HCH3 593 aa17.29■□□□□ 0.36
MSLN-207ENST00000566549 DNAJB12Q9NXW2 375 aaKnown RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 PLEKHB1Q9UF11 243 aaPredicted RBP17.29■□□□□ 0.36
MSLN-207ENST00000566549 AGRPO00253 132 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 NGFRP08138 427 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 CLUP10909 449 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 CAPZBP47756 277 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 CDC20Q12834 499 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 TMEM99Q8N816 258 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 RCBTB1Q8NDN9 531 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 NLGN4YQ8NFZ3 816 aaPredicted RBP17.28■□□□□ 0.36
MSLN-207ENST00000566549 TIGARQ9NQ88 270 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 PRTFDC1Q9NRG1 225 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 ERVK-19Q9WJR5 959 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 EXOGQ9Y2C4 368 aaKnown RBP17.28■□□□□ 0.36
MSLN-207ENST00000566549 TMEM184BQ9Y519 407 aaPredicted RBP17.28■□□□□ 0.36
MSLN-207ENST00000566549 A0A0B4J2E0 115 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 A0A1B0GX12 115 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 A0A1W2PQL4 384 aaPredicted RBP17.28■□□□□ 0.36
MSLN-207ENST00000566549 CD8B2A6NJW9 211 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 DVL2O14641 736 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 CASKO14936 926 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 NCR1O76036 304 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 PTTG1O95997 202 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 IGHA1P01876 353 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 IFNA16P05015 189 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 CD8BP10966 210 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 DRD5P21918 477 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 NOS3P29474 1203 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 FOXK2Q01167 660 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 TMEM44Q2T9K0 475 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 DEFB133Q30KQ1 61 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 ALG10BQ5I7T1 473 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 NKAIN2Q5VXU1 208 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 VSTM2LQ96N03 204 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 DGAT2Q96PD7 388 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 ZNF559Q9BR84 538 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 FBXL4Q9UKA2 621 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 SIGLEC7Q9Y286 467 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 MAU2Q9Y6X3 613 aa17.28■□□□□ 0.36
MSLN-207ENST00000566549 IQCMA0A1B0GVH7 501 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 AQP9O43315 295 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 AKAP8O43823 692 aaKnown RBP17.27■□□□□ 0.36
MSLN-207ENST00000566549 FMO6PO60774 539 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 GYPBP06028 91 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 SLC9A3P48764 834 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 ZNF79Q15937 498 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 BAK1Q16611 211 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 GARNL3Q5VVW2 1013 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 ZNF322Q6U7Q0 402 aaPredicted RBP17.27■□□□□ 0.36
MSLN-207ENST00000566549 CCBE1Q6UXH8 406 aaPredicted RBP17.27■□□□□ 0.36
MSLN-207ENST00000566549 OR10H4Q8NGA5 316 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 CLIP3Q96DZ5 547 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 MIXL1Q9H2W2 232 aa17.27■□□□□ 0.36
MSLN-207ENST00000566549 MRPS33Q9Y291 106 aaKnown RBP17.27■□□□□ 0.36
MSLN-207ENST00000566549 C2orf92A0A1B0GVN3 265 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 HRO43593 1189 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 RCBTB2O95199 551 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 PPP1R3DO95685 299 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 CSF2P04141 144 aa17.27■□□□□ 0.35
MSLN-207ENST00000566549 MLLT3P42568 568 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms