RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-210	ENST00000565966	KCNJ16	Q9NPI9	418 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	THUMPD1	Q9NXG2	353 aa	Known RBP	12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ARMCX1	Q9P291	453 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	VDAC3	Q9Y277	283 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CARD8	Q9Y2G2	431 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ZNF337	Q9Y3M9	751 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CAPN7	Q9Y6W3	813 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MPDZ	O75970	2070 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	NAV2	Q8IVL1	2488 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CELSR2	Q9HCU4	2923 aa		12.5	□□□□□ -0.41
HERPUD1-210	ENST00000565966	OR2M5	A3KFT3	312 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MBD3L3	A6NE82	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CYSRT1	A8MQ03	144 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	KDM4E	B2RXH2	506 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966		H0Y3Z8	333 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	GTPBP1	O00178	669 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	SLC22A2	O15244	555 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	HNRNPR	O43390	633 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	HCRTR2	O43614	444 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	EIF4E2	O60573	245 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CCDC22	O60826	627 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	BCHE	P06276	602 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	GPX2	P18283	190 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	P2RX1	P51575	399 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ZNF41	P51814	821 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	NFYC	Q13952	458 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MAPRE2	Q15555	327 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	NDUFAF6	Q330K2	333 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CBLN3	Q6UW01	205 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ADGRE4P	Q86SQ3	457 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	SNX32	Q86XE0	403 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	TNIP2	Q8NFZ5	429 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	OR5M1	Q8NGP8	315 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	SLC38A5	Q8WUX1	472 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	PMM1	Q92871	262 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ZBTB8A	Q96BR9	441 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	TMEM19	Q96HH6	336 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ANKRD27	Q96NW4	1050 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	UCN2	Q96RP3	112 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CGREF1	Q99674	301 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	TUBA1C	Q9BQE3	449 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	QRSL1	Q9H0R6	528 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MTHFD2L	Q9H903	347 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	A4GALT	Q9NPC4	353 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	STOML1	Q9UBI4	398 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ICAM5	Q9UMF0	924 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	L3MBTL1	Q9Y468	752 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	UNC79	Q9P2D8	2635 aa		12.49	□□□□□ -0.41
HERPUD1-210	ENST00000565966	DSPP	Q9NZW4	1301 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	LOC100653049	A0A140TA62	436 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	NKX2-6	A6NCS4	301 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	AGAP5	A6NIR3	686 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	FAM90A27P	A6NNH2	459 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	BBIP1	A8MTZ0	92 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	EVPLL	A8MZ36	301 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	SHISA8	B8ZZ34	492 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966		H3BML4	177 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	C19orf84	I3L1E1	186 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ZNF264	O43296	627 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	KRT34	O76011	436 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CSTA	P01040	98 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	UBL4A	P11441	157 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ZNF17	P17021	662 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	POU3F2	P20265	443 aa	Predicted RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	RPS4Y1	P22090	263 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	SUMO3	P55854	103 aa	Predicted RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	EEFSEC	P57772	596 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	FGFBP1	Q14512	234 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	TMEM44	Q2T9K0	475 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	SLC25A35	Q3KQZ1	300 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	EIF3M	Q7L2H7	374 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CHMP1B	Q7LBR1	199 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MTDH	Q86UE4	582 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	LIX1L	Q8IVB5	337 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MEIOB	Q8N635	442 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MAL2	Q969L2	176 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	NPAS1	Q99742	590 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	TRIM8	Q9BZR9	551 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	LAT2	Q9GZY6	243 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MED17	Q9NVC6	651 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CALML5	Q9NZT1	146 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CORO2B	Q9UQ03	480 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	AP4B1	Q9Y6B7	739 aa		12.48	□□□□□ -0.41
HERPUD1-210	ENST00000565966	C7orf72	A4D263	438 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	TMEM247	A6NEH6	219 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CLDN24	A6NM45	220 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CLCA1	A8K7I4	914 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	DVL2	O14641	736 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	MRAS	O14807	208 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	BCAS1	O75363	584 aa	Predicted RBP	12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	ARAF	P10398	606 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	COX6B1	P14854	86 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	PGM1	P36871	562 aa		12.47	□□□□□ -0.41
HERPUD1-210	ENST00000565966	CRISP3	P54108	245 aa		12.47	□□□□□ -0.41

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