RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 WDR93Q6P2C0 686 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 STAC2Q6ZMT1 411 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 LRRC34Q8IZ02 419 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 VPS37AQ8NEZ2 397 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 STEAP2Q8NFT2 490 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 FBXO30Q8TB52 745 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 GPR119Q8TDV5 335 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 AENQ8WTP8 325 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 CCL19Q99731 98 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 NMUR2Q9GZQ4 415 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 CXorf36Q9H7Y0 433 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 SSU72Q9NP77 194 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 NOP53Q9NZM5 478 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 PCDHGB4Q9UN71 923 aa10.89□□□□□ -0.67
GTF3C1-204ENST00000564664 ETV2O00321 342 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 RNASET2O00584 256 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 CFLARO15519 480 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF264O43296 627 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 KLF4O43474 513 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 DNAJA2O60884 412 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 NUDT14O95848 222 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 C6orf47O95873 294 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 YES1P07947 543 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 ROS1P08922 2347 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 MYZAPP0CAP1 466 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 G6PDP11413 515 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 NID1P14543 1247 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 EFNA1P20827 205 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 MATN1P21941 496 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 LOXP28300 417 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 AGTR1P30556 359 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 ADSLP30566 484 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 RAC3P60763 192 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF117Q03924 483 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 CBFBQ13951 182 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 TMEM201Q5SNT2 666 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 ZCCHC23Q6ZST2 131 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 PLEKHM3Q6ZWE6 761 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 SSX8Q7RTT4 187 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF550Q7Z398 422 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 KRTAP1-3Q8IUG1 177 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 OR8J2Q8NGG1 315 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 OR5W2Q8NH69 310 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 FBXO27Q8NI29 283 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 PPP1R14CQ8TAE6 165 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 AGR3Q8TD06 166 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 RNF128Q8TEB7 428 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 OR7D2Q96RA2 312 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 SDF2Q99470 211 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 NPAS1Q99742 590 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 C1orf50Q9BV19 199 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 GSX1Q9H4S2 264 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 UBTD1Q9HAC8 227 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 CLEC4AQ9UMR7 237 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 CARD8Q9Y2G2 431 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 VPS13CQ709C8 3753 aa10.88□□□□□ -0.67
GTF3C1-204ENST00000564664 DSCAMO60469 2012 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 EFNA2O43921 213 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 STX11O75558 287 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 NTN1O95631 604 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 OPN1LWP04000 364 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 SERPINE1P05121 402 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 THBDP07204 575 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 PRKCAP17252 672 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 FKBP2P26885 142 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ARRB2P32121 409 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 HBA1P69905 142 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 FOXF1Q12946 379 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 SELENBP1Q13228 472 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 P2RY6Q15077 328 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF141Q15928 474 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ZNF239Q16600 458 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ARHGAP11BQ3KRB8 267 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 TMEM176BQ3YBM2 270 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ANXA8L1Q5VT79 327 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ANKRD34AQ69YU3 496 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 CBLN3Q6UW01 205 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 C22orf34Q6ZV56 151 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 C6orf120Q7Z4R8 191 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 MREGQ8N565 214 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 KRTCAP2Q8N6L1 136 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 MIPOL1Q8TD10 442 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ST8SIA1Q92185 356 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 HSD17B8Q92506 261 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 OTUB1Q96FW1 271 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ZC3HAV1LQ96H79 300 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ACTR6Q9GZN1 396 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 LAT2Q9GZY6 243 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 TMEM185BQ9H7F4 350 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 NGBQ9NPG2 151 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 POLE3Q9NRF9 147 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 EXD2Q9NVH0 621 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 KLHL13Q9P2N7 655 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 GIMAP2Q9UG22 337 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
GTF3C1-204ENST00000564664 ABCA2Q9BZC7 2435 aa10.86□□□□□ -0.67
GTF3C1-204ENST00000564664 PRSS51A0A1B0GVH4 220 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms