RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 CTBP2P56545 445 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 PDE7AQ13946 482 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 SGCBQ16585 318 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 ZNF672Q499Z4 452 aaPredicted RBP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 CPTPQ5TA50 214 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 NPSR1Q6W5P4 371 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 DNAJC14Q6Y2X3 702 aaPredicted RBP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 BEND4Q6ZU67 534 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 CLHC1Q8NHS4 586 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 NEUROG1Q92886 237 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 EFHD2Q96C19 240 aaPredicted RBP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 PPP1R36Q96LQ0 422 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 VSTM2LQ96N03 204 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 C7orf26Q96N11 449 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 AMDHD1Q96NU7 426 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 C1orf50Q9BV19 199 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 BEX2Q9BXY8 128 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 AMBRA1Q9C0C7 1298 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 ANKRA2Q9H9E1 313 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 DDX18Q9NVP1 670 aaKnown RBP13.17□□□□□ -0.3
SCAPER-209ENST00000563919 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 ATP6V1HQ9UI12 483 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 AP4B1Q9Y6B7 739 aa13.17□□□□□ -0.3
SCAPER-209ENST00000563919 TTC36A6NLP5 189 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 CLOCKO15516 846 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 SCO2O43819 266 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 CD8AP01732 235 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 CD3EP07766 207 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 KITP10721 976 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 G6PDP11413 515 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 CLDN8P56748 225 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 C21orf58P58505 322 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 MRPS22P82650 360 aaKnown RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 FAPQ12884 760 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 ZNHIT3Q15649 155 aaPredicted RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 TMEM249Q2WGJ8 235 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 LSM12Q3MHD2 195 aaKnown RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 GLYR1Q49A26 553 aaPredicted RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 NCMAPQ5T1S8 102 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 OGFOD2Q6N063 350 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 SPATA19Q7Z5L4 167 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 GGNQ86UU5 652 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 OR4N2Q8NGD1 307 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 KAT2AQ92830 837 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 C1GALT1C1Q96EU7 318 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 HS6ST2Q96MM7 605 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 KCNK17Q96T54 332 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 RHNO1Q9BSD3 238 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 PRRG4Q9BZD6 226 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 GLIPR2Q9H4G4 154 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 C3orf14Q9HBI5 128 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 BARX1Q9HBU1 254 aaPredicted RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 MED4Q9NPJ6 270 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 MARCOQ9UEW3 520 aaPredicted RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 GIMAP2Q9UG22 337 aa13.16□□□□□ -0.3
SCAPER-209ENST00000563919 GDF2Q9UK05 429 aaPredicted RBP13.16□□□□□ -0.3
SCAPER-209ENST00000563919 IGHV4-30-2A0A087WSY4 118 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 A0A1W2PP18 115 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 FADS1O60427 444 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 PTGR1Q14914 329 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 MLC1Q15049 377 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 PPP4R4Q6NUP7 873 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 STK32CQ86UX6 486 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
SCAPER-209ENST00000563919 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 CEP70Q8NHQ1 597 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 S100PBPQ96BU1 408 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 ELP4Q96EB1 424 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 RTN4RQ9BZR6 473 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 DPY30Q9C005 99 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 BHLHE41Q9C0J9 482 aaPredicted RBP13.15□□□□□ -0.3
SCAPER-209ENST00000563919 ESRP2Q9H6T0 727 aaKnown RBP13.15□□□□□ -0.3
SCAPER-209ENST00000563919 PTGES2Q9H7Z7 377 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 FOLH1BQ9HBA9 442 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 SDHAF3Q9NRP4 125 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 LPAR3Q9UBY5 353 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 C19orf53Q9UNZ5 99 aaPredicted RBP13.15□□□□□ -0.3
SCAPER-209ENST00000563919 TGP01266 2768 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 MGAM2Q2M2H8 2515 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 FREM1Q5H8C1 2179 aa13.15□□□□□ -0.3
SCAPER-209ENST00000563919 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
SCAPER-209ENST00000563919 A0A1W2PRB8 838 aa13.14□□□□□ -0.31
SCAPER-209ENST00000563919 TGDSO95455 350 aa13.14□□□□□ -0.31
SCAPER-209ENST00000563919 FRKP42685 505 aaPredicted RBP13.14□□□□□ -0.31
SCAPER-209ENST00000563919 EIF1AXP47813 144 aaKnown RBP13.14□□□□□ -0.31
SCAPER-209ENST00000563919 CLNS1AP54105 237 aaKnown RBP13.14□□□□□ -0.31
SCAPER-209ENST00000563919 PRR5P85299 388 aa13.14□□□□□ -0.31
SCAPER-209ENST00000563919 HSPB3Q12988 150 aa13.14□□□□□ -0.31
SCAPER-209ENST00000563919 DPY19L1Q2PZI1 675 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms