RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SMU1Q2TAY7 513 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 PDZK1Q5T2W1 519 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 C16orf62Q7Z3J2 963 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 C6orf120Q7Z4R8 191 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 OR6K3Q8NGY3 331 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 ROBO4Q8WZ75 1007 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 OSTF1Q92882 214 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 REXO5Q96IC2 774 aaKnown RBP15.83■□□□□ 0.12
NME3-205ENST00000563854 SERHL2Q9H4I8 314 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 DTNAQ9Y4J8 743 aa15.83■□□□□ 0.12
NME3-205ENST00000563854 PRRC2AP48634 2157 aaKnown RBP15.82■□□□□ 0.12
NME3-205ENST00000563854 ADAMDEC1O15204 470 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 SS18L1O75177 396 aaPredicted RBP15.82■□□□□ 0.12
NME3-205ENST00000563854 DHRS4L1P0CG22 281 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 SUMO3P55854 103 aaPredicted RBP15.82■□□□□ 0.12
NME3-205ENST00000563854 NME5P56597 212 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 CARD18P57730 90 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 HHATQ5VTY9 493 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 MGARPQ8TDB4 240 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 MBD6Q96DN6 1003 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 ARSGQ96EG1 525 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 SDF2Q99470 211 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 OR51I1Q9H343 314 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 UBTD1Q9HAC8 227 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 PNPOQ9NVS9 261 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 RAB21Q9UL25 225 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 ICAM5Q9UMF0 924 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.82■□□□□ 0.12
NME3-205ENST00000563854 ITPR3Q14573 2671 aa15.82■□□□□ 0.12
NME3-205ENST00000563854 DEFB108AA8MXU0 73 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 RNASET2O00584 256 aaKnown RBP15.81■□□□□ 0.12
NME3-205ENST00000563854 ZNF195O14628 629 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 SIAH2O43255 324 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 ZNF264O43296 627 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 SOX30O94993 753 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 LBPP18428 481 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 CRYGSP22914 178 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 ELK4P28324 431 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 BST1Q10588 318 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 FOXD4Q12950 439 aaPredicted RBP15.81■□□□□ 0.12
NME3-205ENST00000563854 TNFAIP8L2Q6P589 184 aaPredicted RBP15.81■□□□□ 0.12
NME3-205ENST00000563854 TOR1AIP2Q8NFQ8 470 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 TMUB1Q9BVT8 246 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 SRXN1Q9BYN0 137 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 MKLN1Q9UL63 735 aa15.81■□□□□ 0.12
NME3-205ENST00000563854 GPC6Q9Y625 555 aaPredicted RBP15.81■□□□□ 0.12
NME3-205ENST00000563854 CENPVL1A0A0U1RR11 272 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 SERINC4A6NH21 518 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 DUXAA6NLW8 204 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 GJE1A6NN92 205 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 NPIPB9F8W1W9 429 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 STX11O75558 287 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 SNUPNO95149 360 aaKnown RBP15.8■□□□□ 0.12
NME3-205ENST00000563854 AK1P00568 194 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 TUBBP07437 444 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 PRKCAP17252 672 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 CD53P19397 219 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 AGTR1P30556 359 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 SLC7A1P30825 629 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 QPRTQ15274 297 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ZNF239Q16600 458 aaKnown RBP15.8■□□□□ 0.12
NME3-205ENST00000563854 TMEM176BQ3YBM2 270 aaPredicted RBP15.8■□□□□ 0.12
NME3-205ENST00000563854 SPANXN4Q5MJ08 99 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ATAD3BQ5T9A4 648 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ANXA8L1Q5VT79 327 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ALKBH2Q6NS38 261 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 STK32CQ86UX6 486 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 KIRREL3Q8IZU9 778 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 VPS37AQ8NEZ2 397 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 OR8J2Q8NGG1 315 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 GPR119Q8TDV5 335 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ABHD3Q8WU67 409 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 XAGE5Q8WWM1 108 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 RAB8BQ92930 207 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 TIGARQ9NQ88 270 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 PLSCR4Q9NRQ2 329 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 GLRX2Q9NS18 164 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 EXD2Q9NVH0 621 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ACTL7BQ9Y614 415 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 ZFHX3Q15911 3703 aa15.8■□□□□ 0.12
NME3-205ENST00000563854 C9JVG2 144 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 E9PBE3 544 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 EFNA2O43921 213 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 FCMRO60667 390 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 CSTAP01040 98 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 UBTFL6P0CB48 400 aaPredicted RBP15.79■□□□□ 0.12
NME3-205ENST00000563854 OR12D1P0DN82 309 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 UQCRC2P22695 453 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 ADH6P28332 368 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 CHI3L1P36222 383 aaPredicted RBP15.79■□□□□ 0.12
NME3-205ENST00000563854 PCYT1AP49585 367 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 ADAM8P78325 824 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 SELENBP1Q13228 472 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 CBFBQ13951 182 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 ARHGAP11BQ3KRB8 267 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 FAM174BQ3ZCQ3 159 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 TMEM201Q5SNT2 666 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 GTF2IRD2BQ6EKJ0 949 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 C22orf34Q6ZV56 151 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 HMGN2P46Q86SG4 172 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms