RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 BPIFB3P59826 476 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 DHX34Q14147 1143 aaKnown RBP8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 SLMAPQ14BN4 828 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 ADPRMQ3LIE5 342 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 PCID2Q5JVF3 399 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 PDSS1Q5T2R2 415 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 FBXW9Q5XUX1 488 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 RAPH1Q70E73 1250 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 FCRLAQ7L513 359 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 CCDC170Q8IYT3 715 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 KLHDC1Q8N7A1 406 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 ST7LQ8TDW4 575 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 NEIL2Q969S2 332 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 CPNE4Q96A23 557 aaPredicted RBP8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 MFSD3Q96ES6 412 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 AIF1LQ9BQI0 150 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 ANP32EQ9BTT0 268 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 KIFC1Q9BW19 673 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 GPR61Q9BZJ8 451 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 PTGES2Q9H7Z7 377 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 PRDM7Q9NQW5 492 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 MED11Q9P086 117 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 WIPI2Q9Y4P8 454 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 AGAP5A6NIR3 686 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 TRIM49D1C9J1S8 452 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 GOLGA8KD6RF30 607 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 GOLGA8TH3BQL2 631 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 M0R233 179 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CBFA2T2O43439 604 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 IGHV4-59P01825 116 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 OPN1LWP04000 364 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CHRM2P08172 466 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 ZSCAN5DPP0CG00 497 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 TCN1P20061 433 aaPredicted RBP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 GABRA5P31644 462 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 STIP1P31948 543 aaKnown RBP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CD80P33681 288 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 RAD52P43351 418 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CARD18P57730 90 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 RAC1P63000 192 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 TIAL1Q01085 375 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CSHL1Q14406 222 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 RBBP5Q15291 538 aaKnown RBP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 NHLRC1Q6VVB1 395 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 PPP1R21Q6ZMI0 780 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 GSPT2Q8IYD1 628 aaKnown RBP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC43A2Q8N370 569 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 UHMK1Q8TAS1 419 aaKnown RBP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 TANKQ92844 425 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC35A4Q96G79 324 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 HES6Q96HZ4 224 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 TCF12Q99081 682 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 GAL3ST1Q99999 423 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 PSD2Q9BQI7 771 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 REXO4Q9GZR2 422 aaKnown RBP8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CXorf36Q9H7Y0 433 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 CXorf21Q9HAI6 301 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 RAB6BQ9NRW1 208 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 DNAH17Q9UFH2 4485 aa8.93□□□□□ -0.98
HDGFL3-204ENST00000563790 RNASEK-C17orf49H0YIS7 233 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 PHGDHO43175 533 aaKnown RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 NDUFB5O43674 189 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 NDUFS3O75489 264 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 VAPBO95292 243 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 LY6G6CO95867 125 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 TBX6O95947 436 aaPredicted RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 APRTP07741 180 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 HIST1H1TP22492 207 aaPredicted RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 KCTD19Q17RG1 926 aaPredicted RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 TBRG1Q3YBR2 411 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 OTUD3Q5T2D3 398 aaPredicted RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 LGSNQ5TDP6 509 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC35E4Q6ICL7 350 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 MBOAT1Q6ZNC8 495 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 UBE2R2Q712K3 238 aaPredicted RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 ZNF100Q8IYN0 542 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 RPP25LQ8N5L8 163 aaKnown RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 PRELID2Q8N945 189 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 VPS39Q96JC1 886 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC38A2Q96QD8 506 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 SRXN1Q9BYN0 137 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 INTS10Q9NVR2 710 aaKnown RBP8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 KLHL9Q9P2J3 617 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 ANAPC5Q9UJX4 755 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 CRYL1Q9Y2S2 319 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 USH1CQ9Y6N9 552 aa8.92□□□□□ -0.98
HDGFL3-204ENST00000563790 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 A0A1B0GW55 424 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 H3BMM5 538 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 FBXO24O75426 580 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 WNT11O96014 354 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 IFNB1P01574 187 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 ITGA5P08648 1049 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 TPM1P09493 284 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4L2P0CJ85 424 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4L3P0CJ86 424 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4L5P0CJ88 424 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4L6P0CJ89 424 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4L7P0CJ90 424 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms