RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DDCP20711 480 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 HSD3B2P26439 372 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ELK4P28324 431 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 PHBP35232 272 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ARL1P40616 181 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 COMPP49747 757 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF83P51522 516 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 NCBP2P52298 156 aaKnown RBP eCLIP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 CARD18P57730 90 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 NAB1Q13506 487 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 SLC29A2Q14542 456 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 RNPS1Q15287 305 aaKnown RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 NDUFAF6Q330K2 333 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 UNC50Q53HI1 259 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 TMEM201Q5SNT2 666 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ABLIM2Q6H8Q1 611 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF551Q7Z340 670 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 RFLNBQ8N5W9 214 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 CDYL2Q8N8U2 506 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 EIF1ADQ8N9N8 165 aaKnown RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 WDR31Q8NA23 367 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 FBXO30Q8TB52 745 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ATP6V1E2Q96A05 226 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 CPNE4Q96A23 557 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF775Q96BV0 537 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 OTUB1Q96FW1 271 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-204ENST00000563739 MRGPRX4Q96LA9 322 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 KCNA7Q96RP8 456 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 FUT8Q9BYC5 575 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 NGBQ9NPG2 151 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 FANCFQ9NPI8 374 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 FAIMQ9NVQ4 179 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 RAB21Q9UL25 225 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 SNX8Q9Y5X2 465 aa9.09□□□□□ -0.95
SF3B3-204ENST00000563739 NPIPB8E9PQR5 432 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 CYTIPO60759 359 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 KCNK2O95069 426 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 ESRRBO95718 433 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 ITGA5P08648 1049 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 GABRA3P34903 492 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 HSD17B3P37058 310 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 RAB35Q15286 201 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 DUSP5Q16690 384 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 CCNJQ5T5M9 372 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 SLC16A11Q8NCK7 471 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 FBXO27Q8NI29 283 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 ZFP90Q8TF47 636 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 TMEM237Q96Q45 408 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 BPESC1Q9GZL8 116 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 TNFRSF12AQ9NP84 129 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 DDX18Q9NVP1 670 aaKnown RBP9.08□□□□□ -0.96
SF3B3-204ENST00000563739 NTMQ9P121 344 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 ICAM5Q9UMF0 924 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 SNX6Q9UNH7 406 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 RYR3Q15413 4870 aa9.08□□□□□ -0.96
SF3B3-204ENST00000563739 NPIPA5A0A0B4J1W7 369 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 A0A1W2PQD3 144 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 LRP5LA4QPB2 252 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 CCDC151A5D8V7 595 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF716A6NP11 495 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 NPIPA7E9PJI5 369 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ATP6V1G2-DDX39BF2Z307 99 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF195O14628 629 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 NDUFB5O43674 189 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 TCF21O43680 179 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 RRP9O43818 475 aaKnown RBP9.07□□□□□ -0.96
SF3B3-204ENST00000563739 RAD51DO75771 328 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 PRKD3O94806 890 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 SLITRK5O94991 958 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 OTCP00480 354 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 IGHV3-9P01782 118 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ABHD2P08910 425 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 CSF3P09919 207 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 FAM153BP0C7A2 387 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 NPIPA8P0DM63 369 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 APEHP13798 732 aaKnown RBP9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF23P17027 643 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 PRKCAP17252 672 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 GGT1P19440 569 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 MPIP34949 423 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 SERPINB8P50452 374 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 FOXA1P55317 472 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF763Q0D2J5 394 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 TMEM176BQ3YBM2 270 aaPredicted RBP9.07□□□□□ -0.96
SF3B3-204ENST00000563739 FAM153CQ494X1 144 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 SLC25A53Q5H9E4 307 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF544Q6NX49 715 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 CCDC91Q7Z6B0 441 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 SAMD14Q8IZD0 417 aaPredicted RBP9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ANKS4BQ8N8V4 417 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 OR52N5Q8NH56 324 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 MRRFQ96E11 262 aaKnown RBP9.07□□□□□ -0.96
SF3B3-204ENST00000563739 EGLN2Q96KS0 407 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 FOXN4Q96NZ1 517 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 BBS4Q96RK4 519 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF382Q96SR6 550 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 TXLNGYQ9BZA5 131 aa9.07□□□□□ -0.96
SF3B3-204ENST00000563739 VPS11Q9H270 941 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms