RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 DENND6BQ8NEG7 585 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 IPMKQ8NFU5 416 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 OR6K2Q8NGY2 324 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 FGFBP3Q8TAT2 258 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 GANCQ8TET4 914 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 PHLDA1Q8WV24 401 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 DYRK2Q92630 601 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TMEM186Q96B77 213 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 NSMCE3Q96MG7 304 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF641Q96N77 438 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 IL12RB2Q99665 862 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TRIM51Q9BSJ1 452 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 NUSAP1Q9BXS6 441 aaKnown RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ATP13A3Q9H7F0 1226 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TM9SF3Q9HD45 589 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TMEM9BQ9NQ34 198 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 DYRK4Q9NR20 520 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF701Q9NV72 531 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 P4HTMQ9NXG6 502 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 KLHL8Q9P2G9 620 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 B3GAT1Q9P2W7 334 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 RABL2BQ9UNT1 228 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 PYGO1Q9Y3Y4 419 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 PRSS21Q9Y6M0 314 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 FRYQ5TBA9 3013 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 NCOR2Q9Y618 2525 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CEP295Q9C0D2 2601 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CHD8Q9HCK8 2581 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 KNTC1P50748 2209 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 A0A1W2PQ67 120 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 FAM47DPA6NHR8 397 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 PRAMEF26H0Y7S4 382 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 DFFBO76075 338 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MT-ATP6P00846 226 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 IGHV2-70P01814 119 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 HLA-DQB2P05538 268 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 CCNB1P14635 433 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 AREGP15514 252 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 HNRNPA2B1P22626 353 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 PSMB4P28070 264 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MMP12P39900 470 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MAPK12P53778 367 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MAXP61244 160 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 RPS21P63220 83 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 ELP6Q0PNE2 266 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 OVGP1Q12889 678 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 TFDP2Q14188 446 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 IHHQ14623 411 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 NPTX1Q15818 432 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 UGP2Q16851 508 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 TMEM52BQ4KMG9 183 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 TFDP3Q5H9I0 405 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MARC1Q5VT66 337 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SEL1L3Q68CR1 1132 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 KCTD11Q693B1 232 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 PODNL1Q6PEZ8 512 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 BHLHB9Q6PI77 547 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 GCNT7Q6ZNI0 430 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 KIAA1328Q86T90 577 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 NT5DC3Q86UY8 548 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 NUDT13Q86X67 352 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SERPINA12Q8IW75 414 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 LRRC8AQ8IWT6 810 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 RCOR2Q8IZ40 523 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 ELMOD2Q8IZ81 293 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 CDK20Q8IZL9 346 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SYCE1Q8N0S2 351 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 BBS5Q8N3I7 341 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 RAB42Q8N4Z0 105 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 RNF10Q8N5U6 811 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 KBTBD8Q8NFY9 601 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 OR2T11Q8NH01 316 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 OR2T6Q8NHC8 308 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 RNASE8Q8TDE3 154 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SSMEM1Q8WWF3 244 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 CKAP2Q8WWK9 683 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 TADA1Q96BN2 335 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 CDKN2AIPNLQ96HQ2 116 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 RBM41Q96IZ5 413 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 LGMNQ99538 433 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 KLF6Q99612 283 aaPredicted RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 URM1Q9BTM9 101 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MCRIP2Q9BUT9 160 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SLC17A9Q9BYT1 436 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 POLR1EQ9GZS1 481 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 DPH5Q9H2P9 285 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 PPANQ9NQ55 473 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SERINC1Q9NRX5 453 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 TXNDC16Q9P2K2 825 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 SPASTQ9UBP0 616 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 GRID1Q9ULK0 1009 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 EXOGQ9Y2C4 368 aaKnown RBP4.22□□□□□ -1.73
LINC00254-201ENST00000563416 PPIL1Q9Y3C6 166 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 PCM1Q15154 2024 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 ASPMQ8IZT6 3477 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 ANKRD12Q6UB98 2062 aa4.22□□□□□ -1.73
LINC00254-201ENST00000563416 MAP1BP46821 2468 aaKnown RBP4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms