RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SMPDL3BQ92485 455 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 CNOT9Q92600 299 aaKnown RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 ZNF845Q96IR2 970 aaPredicted RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 CPPED1Q9BRF8 314 aaPredicted RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 THUMPD3Q9BV44 507 aaKnown RBP12.53□□□□□ -0.4
TPM1-230ENST00000561266 LAT2Q9GZY6 243 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 POLE3Q9NRF9 147 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 KLHL14Q9P2G3 628 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 CLCF1Q9UBD9 225 aa12.53□□□□□ -0.4
TPM1-230ENST00000561266 CELSR2Q9HCU4 2923 aa12.52□□□□□ -0.4
TPM1-230ENST00000561266 MPDZO75970 2070 aa12.52□□□□□ -0.4
TPM1-230ENST00000561266 AGAP5A6NIR3 686 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 FAM90A27PA6NNH2 459 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 H0Y3Z8 333 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 GTPBP1O00178 669 aaKnown RBP12.52□□□□□ -0.41
TPM1-230ENST00000561266 ZNF264O43296 627 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 SEC14L5O43304 696 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 CYP7B1O75881 506 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 NTN1O95631 604 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 CSTAP01040 98 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 BCHEP06276 602 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
TPM1-230ENST00000561266 UBTFL6P0CB48 400 aaPredicted RBP12.52□□□□□ -0.41
TPM1-230ENST00000561266 UBL4AP11441 157 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 BMP2P12643 396 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 POU3F2P20265 443 aaPredicted RBP12.52□□□□□ -0.41
TPM1-230ENST00000561266 ZNF136P52737 540 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 TFF3Q07654 80 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 FOXF2Q12947 444 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 ADRM1Q16186 407 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.41
TPM1-230ENST00000561266 AAGABQ6PD74 315 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 ENPP6Q6UWR7 440 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 VRK2Q86Y07 508 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 DPP10Q8N608 796 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 RELL2Q8NC24 303 aaPredicted RBP12.52□□□□□ -0.41
TPM1-230ENST00000561266 LILRB4Q8NHJ6 448 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 FBXO27Q8NI29 283 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 TMEM19Q96HH6 336 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 ADGRG7Q96K78 797 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 PIGQQ9BRB3 760 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 TMEM185BQ9H7F4 350 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 TRIM33Q9UPN9 1127 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 DSPPQ9NZW4 1301 aa12.52□□□□□ -0.41
TPM1-230ENST00000561266 A0A087WZY1 265 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 A0A0J9YW62 118 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 C7orf72A4D263 438 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 AP3D1O14617 1153 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 EIF4E2O60573 245 aaKnown RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 SNRPB2P08579 225 aaKnown RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 PEPDP12955 493 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 PRKCAP17252 672 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 GPX2P18283 190 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 DRD4P21917 467 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 CHRNB4P30926 498 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 IRX1P78414 480 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 KCNJ10P78508 379 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 CAPRIN1Q14444 709 aaKnown RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 QPRTQ15274 297 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 BCL2A1Q16548 175 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 EID3Q8N140 333 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 TMCO5AQ8N6Q1 288 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 FIG4Q92562 907 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 UCN2Q96RP3 112 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 RABEP2Q9H5N1 569 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 MTHFD2LQ9H903 347 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 RLIMQ9NVW2 624 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 ARMCX1Q9P291 453 aa12.51□□□□□ -0.41
TPM1-230ENST00000561266 LEF1Q9UJU2 399 aaPredicted RBP12.51□□□□□ -0.41
TPM1-230ENST00000561266 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 H3BNH8 94 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 FXYD1O00168 92 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 ETV2O00321 342 aaPredicted RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 DYNC1I1O14576 645 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 NUDT14O95848 222 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 ZNF17P17021 662 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 PTGER4P35408 488 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 TIMP3P35625 211 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 SLC6A8P48029 635 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 CCR4P51679 360 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 ZNF41P51814 821 aaPredicted RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 MTPNP58546 118 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 TXNL4AP83876 142 aaKnown RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 MRPL2Q5T653 305 aaKnown RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 ZNF836Q6ZNA1 936 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 EIF3MQ7L2H7 374 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms