RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 KLHL22Q53GT1 634 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PYDC2Q56P42 97 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PAGE3Q5JUK9 113 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CCDC144NLQ6NUI1 221 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 HSD17B13Q7Z5P4 300 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PAQR7Q86WK9 346 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 C19orf18Q8NEA5 215 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 OR5M3Q8NGP4 307 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 OR14L1PQ8NHC6 308 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 APH1BQ8WW43 257 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 NT5C3BQ969T7 300 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ZBED6CLQ96FA7 236 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 COQ10AQ96MF6 247 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CCDC115Q96NT0 180 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 COL21A1Q96P44 957 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 FCRL4Q96PJ5 515 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 INPP5KQ9BT40 448 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC29A3Q9BZD2 475 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 GABARAPL1Q9H0R8 117 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 MED28Q9H204 178 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 KLHL1Q9NR64 748 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PHF11Q9UIL8 331 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 LEF1Q9UJU2 399 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 GLYATL1P3A0A0U1RQE8 302 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ZCWPW2A0A1B0GU75 182 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 M0R233 179 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PDCD5O14737 125 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 LYRM1O43325 122 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 RHBDL1O75783 438 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CCNB2O95067 398 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 FBP1P09467 338 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ANKRD34CP0C6C1 535 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 OR56A5P0C7T3 313 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 GLI4P10075 376 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 TGM4P49221 684 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ACSM2AQ08AH3 577 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PPP1R8Q12972 351 aaKnown RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 COTL1Q14019 142 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 LRRC73Q5JTD7 316 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PHYHD1Q5SRE7 291 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 MLIPQ5VWP3 458 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ACSM2BQ68CK6 577 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CLEC6AQ6EIG7 209 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PSRC1Q6PGN9 363 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 GLB1LQ6UWU2 654 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 METTL7BQ6UX53 244 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 DLEU7Q6UYE1 221 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC16A13Q7RTY0 426 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ABI3BPQ7Z7G0 1075 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM135Q86UB9 458 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CCDC71Q8IV32 467 aaPredicted RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SPACA3Q8IXA5 215 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 UCN3Q969E3 161 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC25A28Q96A46 364 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 RHBDF1Q96CC6 855 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 C4orf36Q96KX1 117 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PPP3R2Q96LZ3 170 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 ADAM2Q99965 735 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 G6PC3Q9BUM1 346 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 MAGT1Q9H0U3 335 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 DNTTIP1Q9H147 329 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 NT5DC2Q9H857 520 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 NIT2Q9NQR4 276 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 PLCXD1Q9NUJ7 323 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 UFSP2Q9NUQ7 469 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 CNOT2Q9NZN8 540 aaKnown RBP6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 OR6C3Q9NZP0 311 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 UPB1Q9UBR1 384 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 MIOXQ9UGB7 285 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 NCKAP1Q9Y2A7 1128 aa6.26□□□□□ -1.41
TSPAN3-209ENST00000560715 FOXE1O00358 373 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 POP7O75817 140 aaKnown RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 GLCEO94923 617 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 C1RP00736 705 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 APOC3P02656 99 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 RLN2P04090 185 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF8P17098 575 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 AVPR1AP37288 418 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 CD96P40200 585 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 MICBQ29980 383 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF284Q2VY69 593 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TEX30Q5JUR7 227 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TRIQKQ629K1 86 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 VASNQ6EMK4 673 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 DLK2Q6UY11 383 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF367Q7RTV3 350 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ASPGQ86U10 573 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 TTC29Q8NA56 475 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 STEAP2Q8NFT2 490 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 OTUB1Q96FW1 271 aaPredicted RBP6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 PGAM5Q96HS1 289 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 CXorf58Q96LI9 332 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 MCOLN1Q9GZU1 580 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 RHOJQ9H4E5 214 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ABCB9Q9NP78 766 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SPHK1Q9NYA1 384 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF222Q9UK12 451 aa6.25□□□□□ -1.41
TSPAN3-209ENST00000560715 UTS2RQ9UKP6 389 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms