RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TINAGL1Q9GZM7 467 aaPredicted RBP5.48□□□□□ -1.53
HERC1-208ENST00000560462 OR10A2Q9H208 303 aa5.48□□□□□ -1.53
HERC1-208ENST00000560462 ZBTB26Q9HCK0 441 aa5.48□□□□□ -1.53
HERC1-208ENST00000560462 SIRT3Q9NTG7 399 aaPredicted RBP5.48□□□□□ -1.53
HERC1-208ENST00000560462 SEC14L4Q9UDX3 406 aa5.48□□□□□ -1.53
HERC1-208ENST00000560462 ASIC3Q9UHC3 531 aa5.48□□□□□ -1.53
HERC1-208ENST00000560462 MCTS1Q9ULC4 181 aaKnown RBP5.48□□□□□ -1.53
HERC1-208ENST00000560462 ZNF337Q9Y3M9 751 aa5.48□□□□□ -1.53
HERC1-208ENST00000560462 MUC4Q99102 2169 aa5.48□□□□□ -1.53
HERC1-208ENST00000560462 C2orf92A0A1B0GVN3 265 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 CCDC151A5D8V7 595 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 AQP7P3A6NL99 342 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 ZNF814B7Z6K7 855 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 KLF11O14901 512 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 PPIHO43447 177 aaKnown RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 ANGPTL7O43827 346 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 PGM3O95394 542 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 SYNGR4O95473 234 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 OR4A8P0C604 315 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 SMIM10L1P0DMW3 83 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 PTGDSP41222 190 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 PPP1R2P41236 205 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 ALDH18A1P54886 795 aaKnown RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 TMEM33P57088 247 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 SLC25A11Q02978 314 aaKnown RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 ATPAF1Q5TC12 328 aaPredicted RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 LARP4Q71RC2 724 aaKnown RBP eCLIP5.47□□□□□ -1.53
HERC1-208ENST00000560462 NUFIP2Q7Z417 695 aaKnown RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 C17orf64Q86WR6 236 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 WDFY1Q8IWB7 410 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 CMTM4Q8IZR5 234 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 DYRK2Q92630 601 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 SMIM10Q96HG1 83 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 CDKN2AIPNLQ96HQ2 116 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 AJUBAQ96IF1 538 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 ADGRG7Q96K78 797 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 FCRL5Q96RD9 977 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 APOL2Q9BQE5 337 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 NPLQ9BXD5 320 aaPredicted RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 C1QTNF6Q9BXI9 259 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 DDX47Q9H0S4 455 aaKnown RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 CCDC177Q9NQR7 707 aaPredicted RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 CA10Q9NS85 328 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 NLE1Q9NVX2 485 aaPredicted RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 ANAPC7Q9UJX3 599 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 SLC25A15Q9Y619 301 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 SOX21Q9Y651 276 aaPredicted RBP5.47□□□□□ -1.53
HERC1-208ENST00000560462 AUP1Q9Y679 476 aa5.47□□□□□ -1.53
HERC1-208ENST00000560462 DMBT1Q9UGM3 2413 aaPredicted RBP5.46□□□□□ -1.53
HERC1-208ENST00000560462 A0A1W2PR80 420 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 TCRBV7S2A1N4TA0A589 114 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 OR51F1A6NGY5 319 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 OR6C76A6NM76 312 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ZNF785A8K8V0 405 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 CXorf49A8MYA2 514 aaPredicted RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 B5MCH6 92 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 C4orf51C9J302 202 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 RAB27BO00194 218 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 CYR61O00622 381 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 LDB3O75112 727 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 COQ9O75208 318 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 FGFR1OPO95684 399 aaKnown RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 SYF2O95926 243 aaKnown RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 WNT11O96014 354 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 CATP04040 527 aaKnown RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 ABCB1P08183 1280 aaPredicted RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 CDH1P12830 882 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 SAT1P21673 171 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ACHEP22303 614 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 MSNP26038 577 aaKnown RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 SLC1A3P43003 542 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 SRSF3P84103 164 aaKnown RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 ID2Q02363 134 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ADIPOQQ15848 244 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ITPRIPL1Q6GPH6 555 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 LRRC56Q8IYG6 542 aaPredicted RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 PRR22Q8IZ63 422 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 OR8H2Q8N162 312 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 TBC1D19Q8N5T2 526 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 TMEM86BQ8N661 226 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 GPATCH11Q8N954 259 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 KCTD6Q8NC69 237 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 BBOF1Q8ND07 529 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 DEFB108BQ8NET1 73 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 SDR9C7Q8NEX9 313 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 OR52B6Q8NGF0 335 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ADAMTS16Q8TE57 1224 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 NEIL1Q96FI4 390 aaPredicted RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 RSRC1Q96IZ7 334 aaKnown RBP5.46□□□□□ -1.54
HERC1-208ENST00000560462 CSF3RQ99062 836 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 CHCHD6Q9BRQ6 235 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 KLHL31Q9H511 634 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 C16orf95Q9H693 158 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 DYNLRB1Q9NP97 96 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 SIRT5Q9NXA8 310 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 NSMCE4AQ9NXX6 385 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 SLC17A6Q9P2U8 582 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ICAM5Q9UMF0 924 aa5.46□□□□□ -1.54
HERC1-208ENST00000560462 ALMS1Q8TCU4 4167 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms