RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 WRAP73Q9P2S5 460 aaPredicted RBP2.22□□□□□ -2.05
VPS13C-207ENST00000558919 ATP6V1HQ9UI12 483 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 FOXJ3Q9UPW0 622 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 PLLPQ9Y342 182 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 WSB1Q9Y6I7 421 aa2.22□□□□□ -2.05
VPS13C-207ENST00000558919 ABCC4O15439 1325 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 FAM74A7A6NL05 159 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 SNAI2O43623 268 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 TRAF3IP2O43734 574 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 SNAPINO95295 136 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 WISP3O95389 354 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 MT-ATP6P00846 226 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 EPHX2P34913 555 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 CYLC1P35663 651 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 RPS10P46783 165 aaKnown RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 ATXN3P54252 364 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 YBEYP58557 167 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 SLC10A7Q0GE19 358 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 PDK1Q15118 436 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 FAM74A3Q4VXF1 159 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF691Q5VV52 312 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 LIPNQ5VXI9 398 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 PLBD1Q6P4A8 553 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 SYVN1Q86TM6 617 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 ELMOD2Q8IZ81 293 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 CERS5Q8N5B7 392 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 BCORP1Q8N888 145 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 OR5AU1Q8NGC0 362 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 OR52I1Q8NGK6 324 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 OR5B2Q96R09 309 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 MAGT1Q9H0U3 335 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 ROPN1Q9HAT0 212 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 PATZ1Q9HBE1 687 aaKnown RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 SPASTQ9UBP0 616 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 BTNL2Q9UIR0 455 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 PRG3Q9Y2Y8 225 aaPredicted RBP2.21□□□□□ -2.06
VPS13C-207ENST00000558919 KNSTRNQ9Y448 316 aa2.21□□□□□ -2.06
VPS13C-207ENST00000558919 IGKV6-21A0A0C4DH24 114 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 A0A1B0GWB2 263 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 FAM230AA0A1W2PPH8 454 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 TRIM64A6NGJ6 449 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 TRIM64BA6NI03 449 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 PP2D1A8MPX8 630 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 DUX1O43812 170 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 DFNA5O60443 496 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ECI2O75521 394 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 TOM1L1O75674 476 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 INSP01308 110 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ETS1P14921 441 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 PRDX3P30048 256 aaKnown RBP2.2□□□□□ -2.06
VPS13C-207ENST00000558919 AXLP30530 894 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 PLK1P53350 603 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 RIPPLY1Q0D2K3 151 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ATXN7L3Q14CW9 347 aaPredicted RBP2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ADPRMQ3LIE5 342 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ATF7IP2Q5U623 682 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 FAHD2BQ6P2I3 314 aaPredicted RBP2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ARCQ7LC44 396 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 VRK2Q86Y07 508 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 FAM71E2Q8N5Q1 922 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 C15orf54Q8N8G6 183 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 CNIH3Q8TBE1 160 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 M1APQ8TC57 530 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 MARCH1Q8TCQ1 289 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 RDH5Q92781 318 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 FAHD2AQ96GK7 314 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 CELF6Q96J87 481 aaKnown RBP2.2□□□□□ -2.06
VPS13C-207ENST00000558919 CYP2S1Q96SQ9 504 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 SPXQ9BT56 116 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 B3GNT2Q9NY97 397 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF225Q9UK10 706 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 ANGPTL2Q9UKU9 493 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 SPACA6W5XKT8 324 aa2.2□□□□□ -2.06
VPS13C-207ENST00000558919 IGKV2D-24A0A075B6R9 120 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 NKX2-6A6NCS4 301 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 ANKRD30BLA7E2S9 258 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 FAM166BA8MTA8 275 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 SULT2B1O00204 365 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 ICOSLGO75144 302 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 LALBAP00709 142 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 RNH1P13489 461 aaKnown RBP2.19□□□□□ -2.06
VPS13C-207ENST00000558919 DLSTP36957 453 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 CSNK1DP48730 415 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 STARD6P59095 220 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 PFN3P60673 137 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 CHRNB3Q05901 458 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 LAGE3Q14657 143 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 C16orf72Q14CZ0 275 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 NSDHLQ15738 373 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 CHI3L2Q15782 390 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 CDC37Q16543 378 aaPredicted RBP2.19□□□□□ -2.06
VPS13C-207ENST00000558919 TIGITQ495A1 244 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 RNF165Q6ZSG1 346 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 CBWD2Q8IUF1 395 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 NRMQ8IXM6 262 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 ZNF740Q8NDX6 193 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 MDS2Q8NDY4 140 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 HPDLQ96IR7 371 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 DUSP16Q9BY84 665 aa2.19□□□□□ -2.06
VPS13C-207ENST00000558919 CRNKL1Q9BZJ0 848 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms