RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PSMA8Q8TAA3 256 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 LINC01560Q8TB33 94 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 FNDC9Q8TBE3 224 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 PIWIL2Q8TC59 973 aaKnown RBP10.82□□□□□ -0.68
TPM1-216ENST00000558910 NRGNQ92686 78 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 HOXB13Q92826 284 aaPredicted RBP10.82□□□□□ -0.68
TPM1-216ENST00000558910 VPS33AQ96AX1 596 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 SDF2Q99470 211 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 SPOCK3Q9BQ16 436 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 ENKD1Q9H0I2 346 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 QRSL1Q9H0R6 528 aaKnown RBP10.82□□□□□ -0.68
TPM1-216ENST00000558910 PCDHGB3Q9Y5G1 929 aa10.82□□□□□ -0.68
TPM1-216ENST00000558910 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 MBD3L4A6NDZ8 208 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 MBD3L3A6NE82 208 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 MBD3L5A6NJ08 208 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 SLCO1B7G3V0H7 640 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 CXCL13O43927 109 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 SASH3O75995 380 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 PGRP06401 933 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 UBTFL6P0CB48 400 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 RYKP34925 604 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 OPRM1P35372 400 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 KIR2DL3P43628 341 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 KHKP50053 298 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 ASCL1P50553 236 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 SLC18A1P54219 525 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 ATP12AP54707 1039 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 C21orf58P58505 322 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 PPP2R2AP63151 447 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 GANABQ14697 944 aaKnown RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 SYPL1Q16563 259 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 EXOC3L2Q2M3D2 409 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 GTDC1Q4AE62 458 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 COX20Q5RI15 118 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 EXOSC6Q5RKV6 272 aaKnown RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 C6orf10Q5SRN2 563 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 OGFOD2Q6N063 350 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 VWA1Q6PCB0 445 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 ANKFN1Q8N957 763 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 MBD3L2Q8NHZ7 208 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 FBXO27Q8NI29 283 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 RAB3IL1Q8TBN0 382 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 POC1BQ8TC44 478 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 TESCQ96BS2 214 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 AURKBQ96GD4 344 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 LURAP1Q96LR2 239 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 EBF4Q9BQW3 602 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 RBM24Q9BX46 236 aaKnown RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 OPN3Q9H1Y3 402 aaPredicted RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 INTS9Q9NV88 658 aaKnown RBP10.81□□□□□ -0.68
TPM1-216ENST00000558910 EXD2Q9NVH0 621 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 CRIM1Q9NZV1 1036 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 CLCF1Q9UBD9 225 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 DTNAQ9Y4J8 743 aa10.81□□□□□ -0.68
TPM1-216ENST00000558910 CLDN24A6NM45 220 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 RFXANKO14593 260 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 POLR3GO15318 223 aaPredicted RBP10.8□□□□□ -0.68
TPM1-216ENST00000558910 STX11O75558 287 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 UBL4AP11441 157 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 IDO1P14902 403 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 CCNA2P20248 432 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 ME2P23368 584 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 SHC1P29353 583 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 SSTR2P30874 369 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 SLC6A8P48029 635 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 KCNJ5P48544 419 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 AQP5P55064 265 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 RPS3AP61247 264 aaKnown RBP10.8□□□□□ -0.68
TPM1-216ENST00000558910 HPCAP84074 193 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 POU4F3Q15319 338 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 MAPK14Q16539 360 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 PLPPR5Q32ZL2 321 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 PDCD4Q53EL6 469 aaKnown RBP10.8□□□□□ -0.68
TPM1-216ENST00000558910 KLHL26Q53HC5 615 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 SAXO2Q658L1 398 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 OR10D3Q8NH80 312 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 ACTRT2Q8TDY3 377 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 ROBO4Q8WZ75 1007 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 ROPN1LQ96C74 230 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 ZG16BQ96DA0 208 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 LRRC46Q96FV0 321 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 HSH2DQ96JZ2 352 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 CCDC115Q96NT0 180 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 TM9SF2Q99805 663 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 THUMPD3Q9BV44 507 aaKnown RBP10.8□□□□□ -0.68
TPM1-216ENST00000558910 HOXD1Q9GZZ0 328 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 SLC6A13Q9NSD5 602 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 KCNE5Q9UJ90 142 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 MRPS18CQ9Y3D5 142 aaKnown RBP10.8□□□□□ -0.68
TPM1-216ENST00000558910 WDR45Q9Y484 360 aa10.8□□□□□ -0.68
TPM1-216ENST00000558910 HCFC1P51610 2035 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 MYO9AB2RTY4 2548 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 IGLV3-32A0A0A0MS00 114 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 A0A0J9YW62 118 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 A0A1W2PNV4 684 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 SERINC4A6NH21 518 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 DUXAA6NLW8 204 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 NR5A2O00482 541 aa10.79□□□□□ -0.68
TPM1-216ENST00000558910 ZNF195O14628 629 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms