RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GPR32O75388 356 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 PROZP22891 400 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 KCNC3Q14003 757 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PRAMEF8Q5VWM4 474 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PRAMEF7Q5VXH5 474 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 OR52E8Q6IFG1 317 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 KCNIP4Q6PIL6 250 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 CCDC71Q8IV32 467 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 HSD17B8Q92506 261 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ECHDC3Q96DC8 303 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 NAA11Q9BSU3 229 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PRODH2Q9UF12 536 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PCDHB10Q9UN67 800 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 SOCS6O14544 535 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 CSF1P09603 554 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PSMB5P28074 263 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PROX2Q3B8N5 592 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 TMEM41BQ5BJD5 291 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 SFRP5Q5T4F7 317 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 NXPE4Q6UWF7 544 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 LRRC46Q96FV0 321 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 SNX18Q96RF0 628 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 C20orf24Q9BUV8 137 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 FAM124BQ9H5Z6 455 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 TP53TG5Q9Y2B4 290 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PPLO60437 1756 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 LAMP1P11279 417 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 GRM7Q14831 915 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 FXNQ16595 210 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 B3GNT8Q7Z7M8 397 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ZDHHC14Q8IZN3 488 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 DAZLQ92904 295 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ZNF559Q9BR84 538 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 SIAEQ9HAT2 523 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 TRAPPC13A5PLN9 417 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 MT-CO2P00403 227 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 MRPS34P82930 218 aaKnown RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 ACSM3Q53FZ2 586 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 PIP5KL1Q5T9C9 394 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 TCEAL8Q8IYN2 117 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 DTWD1Q8N5C7 304 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 DDIT4LQ96D03 193 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 ZNF845Q96IR2 970 aaPredicted RBP13.14□□□□□ -0.31
SPG11-210ENST00000558319 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 MRI1Q9BV20 369 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 SLC17A9Q9BYT1 436 aa13.14□□□□□ -0.31
SPG11-210ENST00000558319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 I6L893 689 aaPredicted RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 ANKRD28O15084 1053 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 S1PR4O95977 384 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ARSBP15848 533 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 MC3RP41968 323 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 DUSP3P51452 185 aaPredicted RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 NKX3-2P78367 333 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 GPR50Q13585 617 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 FAM69AQ5T7M9 428 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 OR52H1Q8NGJ2 320 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ACOT11Q8WXI4 607 aaPredicted RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 CDH20Q9HBT6 801 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ZNF355PQ9NSJ1 428 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ZNF43P17038 809 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 OMGP23515 440 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 HOXD13P35453 343 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 HEPHL1Q6MZM0 1159 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ENTHD1Q8IYW4 607 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CELF2-AS1Q8N7Q2 184 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 C17orf105B2RV13 164 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ACOT7O00154 380 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 AP1G1O43747 822 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 DCTP40126 519 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 VEGFCP49767 419 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CCNJQ5T5M9 372 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 UEVLDQ8IX04 471 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CMIPQ8IY22 773 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 EID2Q8N6I1 236 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 RANBP9Q96S59 729 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CTRCQ99895 268 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 SLC6A17Q9H1V8 727 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 A0A1W2PPV4 95 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 CTDSP2O14595 271 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 SIX6O95475 246 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 HSD17B1P14061 328 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 RPA2P15927 270 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 IL4RP24394 825 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 ERVPABLB-1P60509 514 aa13.13□□□□□ -0.31
SPG11-210ENST00000558319 EBPQ15125 230 aaKnown RBP13.13□□□□□ -0.31
SPG11-210ENST00000558319 ABHD17BQ5VST6 288 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms