RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 EPS8Q12929 822 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 OR1C1Q15619 314 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 COLEC12Q5KU26 742 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 WBP2NLQ6ICG8 309 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 SLC25A25Q6KCM7 469 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 ULK3Q6PHR2 472 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 IGFL3Q6UXB1 125 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 DEF8Q6ZN54 512 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 LINC00696Q6ZRV3 163 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 RRM2BQ7LG56 351 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 MARCH3Q86UD3 253 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 LSRQ86X29 649 aaPredicted RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 PLCZ1Q86YW0 608 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 HIPK1Q86Z02 1210 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 TMCO5AQ8N6Q1 288 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 KDF1Q8NAX2 398 aaPredicted RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 FDCSPQ8NFU4 85 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 OR4K17Q8NGC6 315 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 ZNF563Q8TA94 476 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 VANGL1Q8TAA9 524 aaPredicted RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 DUSP19Q8WTR2 217 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 PHF10Q8WUB8 498 aaKnown RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 ST8SIA1Q92185 356 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 ZNF597Q96LX8 424 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 HS6ST2Q96MM7 605 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 AMBRA1Q9C0C7 1298 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 TUBD1Q9UJT1 453 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 A0A1W2PRQ8 180 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 TRAPPC13A5PLN9 417 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 ANKUB1A6NFN9 424 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 TMEM229AB2RXF0 380 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 M0R3H8 397 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 SNPHO15079 494 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 GADD45GO95257 159 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 ATP6V1G2O95670 118 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 NUDT14O95848 222 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 H1F0P07305 194 aaKnown RBP11.33□□□□□ -0.6
TPM1-209ENST00000558072 SP1P08047 785 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 SFTPCP11686 197 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 GP1BBP13224 206 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 RRM2P31350 389 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 DNAJA1P31689 397 aaKnown RBP11.33□□□□□ -0.6
TPM1-209ENST00000558072 GCKP35557 465 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 OR1E2P47887 323 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 HMGA2P52926 109 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 VLDLRP98155 873 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 SKP2Q13309 424 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 DGCR6Q14129 220 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 TRAM2Q15035 370 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 GLYR1Q49A26 553 aaPredicted RBP11.33□□□□□ -0.6
TPM1-209ENST00000558072 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 C5orf46Q6UWT4 87 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 ZDHHC13Q8IUH4 622 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 OFCC1Q8IZS5 231 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 FAM86B1Q8N7N1 296 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 OR1J4Q8NGS1 313 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 CNOT9Q92600 299 aaKnown RBP11.33□□□□□ -0.6
TPM1-209ENST00000558072 SLC38A4Q969I6 547 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 SLCO4A1Q96BD0 722 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 EPYCQ99645 322 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 ADNPQ9H2P0 1102 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 AGPAT4Q9NRZ5 378 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 RLIMQ9NVW2 624 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 ACAD8Q9UKU7 415 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 CARD8Q9Y2G2 431 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 MRPS18CQ9Y3D5 142 aaKnown RBP11.33□□□□□ -0.6
TPM1-209ENST00000558072 SPIN1Q9Y657 262 aaPredicted RBP11.33□□□□□ -0.6
TPM1-209ENST00000558072 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
TPM1-209ENST00000558072 H0Y3Z8 333 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 H3BNX3 289 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 LINC01387J3KSC0 135 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 K7EM74 188 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 TNFRSF11BO00300 401 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 CDC40O60508 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM1-209ENST00000558072 TIPRLO75663 272 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 FPR1P21462 350 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ADH6P28332 368 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 RBM34P42696 430 aaKnown RBP11.32□□□□□ -0.6
TPM1-209ENST00000558072 SLC1A3P43003 542 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ERFP50548 548 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 RNF144AP50876 292 aaPredicted RBP11.32□□□□□ -0.6
TPM1-209ENST00000558072 CCR4P51679 360 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 GAS1P54826 345 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 DSCR4P56555 118 aaPredicted RBP11.32□□□□□ -0.6
TPM1-209ENST00000558072 SPIBQ01892 262 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 OR1Q1Q15612 314 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 CD226Q15762 336 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
TPM1-209ENST00000558072 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 GLIPR1L2Q4G1C9 344 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 ENTPD8Q5MY95 495 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 TIGD3Q6B0B8 471 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 APOOLQ6UXV4 268 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 CDK20Q8IZL9 346 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
TPM1-209ENST00000558072 GATSQ8NAP1 163 aa11.32□□□□□ -0.6
TPM1-209ENST00000558072 OR5K1Q8NHB7 308 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms