RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 FAM214BQ7L5A3 538 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 R3HCC1LQ7Z5L2 792 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ISCA2Q86U28 154 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 TSPYL5Q86VY4 417 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 OR4K17Q8NGC6 315 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 OR5M1Q8NGP8 315 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 LILRB1Q8NHL6 650 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 RAB3IL1Q8TBN0 382 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 STAG3L4Q8TBR4 150 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 WDR20Q8TBZ3 569 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 RNF138Q8WVD3 245 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 C17orf50Q8WW18 174 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ZBTB9Q96C00 473 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 REPS1Q96D71 796 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 TMCO6Q96DC7 493 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 DTNBP1Q96EV8 351 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 FANCD2OSQ96PS1 177 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 BTBD9Q96Q07 612 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ADOQ96SZ5 270 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 RBBP8Q99708 897 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 MRPL1Q9BYD6 325 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ACTR6Q9GZN1 396 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 FAM107BQ9H098 131 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SLCO5A1Q9H2Y9 848 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SSU72Q9NP77 194 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 CPSF2Q9P2I0 782 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 CES1P1Q9UKY3 287 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 RNF11Q9Y3C5 154 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF337Q9Y3M9 751 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF175Q9Y473 711 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SVEP1Q4LDE5 3571 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 A0A096LNT2 108 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 FAM234BA2RU67 622 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 GOLGA6L10A6NI86 522 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 E7ESA3 106 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 PIP5K1BO14986 540 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CLOCKO15516 846 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 SCO2O43819 266 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 GPRIN2O60269 458 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 TSPAN2O60636 221 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 UGDHO60701 494 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ERAL1O75616 437 aaKnown RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 SEC31AO94979 1220 aaKnown RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 PLATP00750 562 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ANXA2P07355 339 aaKnown RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CT45A8P0DMV1 189 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CT45A9P0DMV2 189 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 FCGR2AP12318 317 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 IFNGR1P15260 489 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 HK1P19367 917 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CSNK2A2P19784 350 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 IL12BP29460 328 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 MAPK12P53778 367 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 EEFSECP57772 596 aaKnown RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 RAB10P61026 200 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ILF2Q12905 390 aaKnown RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CT45A2Q5DJT8 189 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CCNYL2Q5T2Q4 361 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 C6orf52Q5T4I8 152 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ADAM5Q6NVV9 412 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 NPSR1Q6W5P4 371 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 LARP4Q71RC2 724 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 GOLGA7Q7Z5G4 137 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CMC1Q7Z7K0 106 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ZBED8Q8IZ13 594 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 METTL25Q8N6Q8 603 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 GBP7Q8N8V2 638 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 FADS6Q8N9I5 356 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 L3MBTL4Q8NA19 623 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 OR2M3Q8NG83 312 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 OR6K3Q8NGY3 331 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 SMAP2Q8WU79 429 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 NEUROG1Q92886 237 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 EFHD2Q96C19 240 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 KLHL29Q96CT2 875 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 TRMT61AQ96FX7 289 aaKnown RBP5.22□□□□□ -1.57
VPS33B-207ENST00000557470 SNX22Q96L94 193 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 OSBPL9Q96SU4 736 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 SERPINI1Q99574 410 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CPNE1Q99829 537 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 LRRC1Q9BTT6 524 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 NTMT1Q9BV86 223 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 C19orf24Q9BVV8 132 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 JAM3Q9BX67 310 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 DSN1Q9H410 356 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ANKRA2Q9H9E1 313 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 NMRAL1Q9HBL8 299 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 MED11Q9P086 117 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 PPP4R1LQ9P1A2 415 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 TXNDC16Q9P2K2 825 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 PRODH2Q9UF12 536 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CDC42EP3Q9UKI2 254 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 CLEC4AQ9UMR7 237 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 LIPT1Q9Y234 373 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 PPP2R2CQ9Y2T4 447 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 RNF115Q9Y4L5 304 aa5.22□□□□□ -1.57
VPS33B-207ENST00000557470 ANGPTL3Q9Y5C1 460 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms