RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZNF750Q32MQ0 723 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZBED5Q49AG3 693 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 GPAT3Q53EU6 434 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZNF311Q5JNZ3 666 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZNF691Q5VV52 312 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 AP1ARQ63HQ0 302 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 MFSD12Q6NUT3 480 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 TMEM107Q6UX40 140 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 C16orf62Q7Z3J2 963 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SZRD1Q7Z422 152 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 TSEN54Q7Z6J9 526 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 GALNT10Q86SR1 603 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PEG10Q86TG7 708 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZNF595Q8IYB9 648 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 HS3ST5Q8IZT8 346 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SLC5A8Q8N695 610 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CDRT4Q8N9R6 151 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SMYD1Q8NB12 490 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 TOR1AIP2Q8NFQ8 470 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 OR6C4Q8NGE1 309 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 OR4C15Q8NGM1 316 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 OR9A2Q8NGT5 310 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZCCHC10Q8TBK6 192 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 NCSTNQ92542 709 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SLC35A4Q96G79 324 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 C16orf58Q96GQ5 468 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 AHCYL2Q96HN2 611 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 FBXL20Q96IG2 436 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 CNDP2Q96KP4 475 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 C10orf90Q96M02 699 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZNF578Q96N58 590 aaPredicted RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 ZNF285Q96NJ3 590 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 COL21A1Q96P44 957 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 FCRL4Q96PJ5 515 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 OR7D2Q96RA2 312 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 FEVQ99581 238 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PSD2Q9BQI7 771 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 FNDC11Q9BVV2 318 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PINK1Q9BXM7 581 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 ADNPQ9H2P0 1102 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PIGUQ9H490 435 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 RIBC2Q9H4K1 309 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 EVA1AQ9H8M9 152 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 NMNAT1Q9HAN9 279 aaPredicted RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 FAM60AQ9NP50 221 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PDE7BQ9NP56 450 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 POLE3Q9NRF9 147 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PAPOLBQ9NRJ5 636 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 SERTAD3Q9UJW9 196 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 NDRG4Q9ULP0 352 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 CDC14AQ9UNH5 594 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 MGAT4BQ9UQ53 548 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 POFUT2Q9Y2G5 429 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 TPRKBQ9Y3C4 175 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 PCDHGB5Q9Y5G0 923 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 GMPPBQ9Y5P6 360 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 LYVE1Q9Y5Y7 322 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SLCO1B1Q9Y6L6 691 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 COMMD3-BMI1R4GMX3 469 aa4.13□□□□□ -1.75
SRP54-212ENST00000556992 SMG1Q96Q15 3661 aaKnown RBP4.13□□□□□ -1.75
SRP54-212ENST00000556992 A0A1B0GVT2 93 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 A0A1W2PRQ8 180 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 TLCD2A6NGC4 264 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 FAM227AF5H4B4 570 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 H0YIG0 161 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 H3BSA7 217 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SGK494L7N484 410 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ZNF701M0R085 212 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 FAAHO00519 579 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PCDH17O14917 1159 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 TOX3O15405 576 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR10H2O60403 315 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 MPZL2O60487 215 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 MITFO75030 526 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 DNAJB6O75190 326 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 COQ9O75208 318 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 STX11O75558 287 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PRKRAO75569 313 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 PIAS2O75928 621 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DIRAS1O95057 198 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 NSA2O95478 260 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 CLIC3O95833 236 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 AK1P00568 194 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OPN1SWP03999 348 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ALPPP05187 535 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DBIP07108 87 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 H1F0P07305 194 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 DCNP07585 359 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 CELA2AP08217 269 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ALPPL2P10696 532 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 NELFEP18615 380 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 GSTM3P21266 225 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 NT5EP21589 574 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CRHBPP24387 322 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PRKAR1BP31321 381 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 GALNSP34059 522 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 POLR2IP36954 125 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 YAP1P46937 504 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 PER3P56645 1201 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms