RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 CD63P08962 238 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 NID1P14543 1247 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MAOAP21397 527 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 GABRA3P34903 492 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 PTGER1P34995 402 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 OR1D4P47884 311 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 DAPP51397 102 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 NUP107P57740 925 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TUBA4AP68366 448 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 BTG2P78543 158 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 DCDP81605 110 aaKnown RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 RHAGQ02094 409 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ZNF267Q14586 743 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 EXOSC7Q15024 291 aaKnown RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CYP27C1Q4G0S4 372 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MFSD4BQ5TF39 518 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TTC33Q6PID6 262 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 DEF8Q6ZN54 512 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 Q6ZS92 163 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TMEM151BQ8IW70 566 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MR1Q95460 341 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TMUB1Q9BVT8 246 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 REPIN1Q9BWE0 567 aaKnown RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 HOXD1Q9GZZ0 328 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 SLC26A1Q9H2B4 701 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 NMNAT1Q9HAN9 279 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 SMURF2Q9HAU4 748 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 KRCC1Q9NPI7 259 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 NECTIN3Q9NQS3 549 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 PAPOLBQ9NRJ5 636 aaKnown RBP13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 NDUFA13Q9P0J0 144 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 COPS7AQ9UBW8 275 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CLCA3PQ9Y6N3 262 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MAU2Q9Y6X3 613 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
TRAPPC6B-206ENST00000556765 FER1L5A0AVI2 2057 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 H3BNH8 94 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TGFBR3LH3BV60 316 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 BCKDKO14874 412 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CPNE3O75131 537 aaKnown RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CDC123O75794 336 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 KCNK2O95069 426 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 OR5F1O95221 314 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TNFRSF1BP20333 461 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 AGXTP21549 392 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 PIGAP37287 484 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 RGS8P57771 180 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ESRRGP62508 458 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 PSG6Q00889 435 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TEKQ02763 1124 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 COX10Q12887 443 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ATP1A4Q13733 1029 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MINDY4Q4G0A6 757 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TSPYL5Q86VY4 417 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 GRAMD2AQ8IUY3 354 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ZADH2Q8N4Q0 377 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ZNF615Q8N8J6 731 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MORN4Q8NDC4 146 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 C17orf47Q8NEP4 570 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TM9SF4Q92544 642 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 RELTQ969Z4 430 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CLIP3Q96DZ5 547 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 OTUB1Q96FW1 271 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 MBOAT4Q96T53 435 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 PITX2Q99697 317 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 CNPPD1Q9BV87 410 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 DGCR6LQ9BY27 220 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 GRIP2Q9C0E4 1043 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 C19orf25Q9UFG5 118 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ERVK-19Q9WJR5 959 aa13.09□□□□□ -0.31
TRAPPC6B-206ENST00000556765 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 GSTM3P21266 225 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 PPICP45877 212 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 GTF2A1P52655 376 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 UGT2B15P54855 530 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 CSNK2BP67870 215 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 EEF1A1P68104 462 aaKnown RBP13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 NPRL3Q12980 569 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 TRAM2Q15035 370 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 ZNF141Q15928 474 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 DECR1Q16698 335 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 NKAIN1Q4KMZ8 207 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 FLYWCH1Q4VC44 716 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 ZNF691Q5VV52 312 aa13.08□□□□□ -0.32
TRAPPC6B-206ENST00000556765 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms