RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 NKPD1Q17RQ9 610 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 WHAMMP3Q1A5X7 153 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 TMEM95Q3KNT9 176 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 LGSNQ5TDP6 509 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 OR5M10Q6IEU7 315 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 SLC22A9Q8IVM8 553 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 SLC44A2Q8IWA5 706 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 MMGT1Q8N4V1 131 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 METTL25Q8N6Q8 603 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 OR4K17Q8NGC6 315 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 OR4N2Q8NGD1 307 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 FAM76AQ8TAV0 307 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 METTL6Q8TCB7 284 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 EFHD2Q96C19 240 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 APIPQ96GX9 242 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF764Q96H86 408 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 METTL2AQ96IZ6 378 aaKnown RBP8.96□□□□□ -0.98
SCFD1-220ENST00000556486 SLC39A3Q9BRY0 314 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 HHATLQ9HCP6 504 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 SDHAF3Q9NRP4 125 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 TMEM216Q9P0N5 145 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 PPP4R1LQ9P1A2 415 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 DUSP13Q9UII6 198 aa8.96□□□□□ -0.98
SCFD1-220ENST00000556486 SVEP1Q4LDE5 3571 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 TMEM82A0PJX8 343 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 OR2M5A3KFT3 312 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 NPIPB8E9PQR5 432 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 POC1B-GALNT4F8VUJ3 575 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 H0YC42 278 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 H3BQF6 201 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 H3BS24 57 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 UPK1AO00322 258 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 TLX2O43763 284 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 TMCC2O75069 709 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 NGFRP08138 427 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ANXA4P09525 319 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 FCGR2AP12318 317 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 IL11P20809 199 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ENPP1P22413 925 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 GCAP28676 217 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 HMOX2P30519 316 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 MAP3K8P41279 467 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 HTR6P50406 440 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 SUCLG1P53597 346 aaKnown RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 TPD52P55327 224 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 NAA20P61599 178 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 DECR1Q16698 335 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 GLE1Q53GS7 698 aaKnown RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 TOR2AQ5JU69 321 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 FAM71E1Q6IPT2 247 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 IL17RELQ6ZVW7 336 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 IKBIPQ70UQ0 350 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 CHMP1BQ7LBR1 199 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ZBTB34Q8NCN2 500 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 VPS37AQ8NEZ2 397 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ACMSDQ8TDX5 336 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 FIG4Q92562 907 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 AKAP1Q92667 903 aaKnown RBP eCLIP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 NEUROG1Q92886 237 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 EXOSC8Q96B26 276 aaKnown RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 C1GALT1C1Q96EU7 318 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF845Q96IR2 970 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 LMF2Q9BU23 707 aaKnown RBP8.95□□□□□ -0.98
SCFD1-220ENST00000556486 RTN4RQ9BZR6 473 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 DSN1Q9H410 356 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 PTGES2Q9H7Z7 377 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 MYNNQ9NPC7 610 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 PFDN4Q9NQP4 134 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ERVK13-1Q9NX77 482 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF337Q9Y3M9 751 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 OR10H1Q9Y4A9 318 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 AP4B1Q9Y6B7 739 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 X6R8D5 127 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 MEGF8Q7Z7M0 2845 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 PRR14LQ5THK1 2151 aa8.95□□□□□ -0.98
SCFD1-220ENST00000556486 EXOC1LA0A1B0GW35 172 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 HS3ST1O14792 307 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 NME6O75414 186 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 GSTA1P08263 222 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 SOD3P08294 240 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 FAM157CP0CG43 387 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PPP3CBP16298 524 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF17P17021 662 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 MTNR1BP49286 362 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PSMD4P55036 377 aaKnown RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PRR5P85299 388 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 RUNX1T1Q06455 604 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 C17orf67Q0P5P2 114 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 RAET1LQ5VY80 246 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 FAM219BQ5XKK7 198 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 ARIH2OSQ8N7S6 290 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 NOA1Q8NC60 698 aaKnown RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 FNDC9Q8TBE3 224 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 RAB3IL1Q8TBN0 382 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 UBE2FQ969M7 185 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 GFM2Q969S9 779 aaKnown RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 ELP4Q96EB1 424 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 CCDC126Q96EE4 140 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms