RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 Q71RC1 249 aaPredicted RBP20.18■□□□□ 0.82
ACTN1-220ENST00000556433 NUDCD3Q8IVD9 361 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 ZNF614Q8N883 585 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 ATP6V1C2Q8NEY4 427 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 OR5AK3PQ8NH89 298 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 PPP1R14CQ8TAE6 165 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 SFXN5Q8TD22 340 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 MOAP1Q96BY2 351 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 OR7D2Q96RA2 312 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 GPC6Q9Y625 555 aaPredicted RBP20.18■□□□□ 0.82
ACTN1-220ENST00000556433 NIPBLQ6KC79 2804 aaeCLIP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 ELK4P28324 431 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 AGTR1P30556 359 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 SUMO3P55854 103 aaPredicted RBP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 EMX2Q04743 252 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 TOMM34Q15785 309 aaPredicted RBP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 ZNF239Q16600 458 aaKnown RBP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 PGS1Q32NB8 556 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 NDUFAF6Q330K2 333 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 TMEM176BQ3YBM2 270 aaPredicted RBP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 GPR119Q8TDV5 335 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 AENQ8WTP8 325 aaKnown RBP20.17■□□□□ 0.82
ACTN1-220ENST00000556433 SRXN1Q9BYN0 137 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 ACTR6Q9GZN1 396 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 GPR52Q9Y2T5 361 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 DTNAQ9Y4J8 743 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 ACTL7BQ9Y614 415 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 ROS1P08922 2347 aa20.17■□□□□ 0.82
ACTN1-220ENST00000556433 GJE1A6NN92 205 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 NPIPB9F8W1W9 429 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 TYROBPO43914 113 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 SOAT1P35610 550 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 ETV4P43268 484 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 CLDN8P56748 225 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 HBA1P69905 142 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 LTBQ06643 244 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 MAD2L1Q13257 205 aaPredicted RBP20.16■□□□□ 0.82
ACTN1-220ENST00000556433 TMEM201Q5SNT2 666 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 EMBQ6PCB8 327 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 BHLHB9Q6PI77 547 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 WFDC8Q8IUA0 241 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 OR5D16Q8NGK9 328 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 RFWD2Q8NHY2 731 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 ABHD3Q8WU67 409 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 CPNE4Q96A23 557 aaPredicted RBP20.16■□□□□ 0.82
ACTN1-220ENST00000556433 PERPQ96FX8 193 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 SDF2Q99470 211 aa20.16■□□□□ 0.82
ACTN1-220ENST00000556433 WDR91A4D1P6 747 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 PRKCAP17252 672 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 RNPS1Q15287 305 aaKnown RBP20.15■□□□□ 0.82
ACTN1-220ENST00000556433 PRSS57Q6UWY2 283 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 CLEC9AQ6UXN8 241 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 PLEKHM3Q6ZWE6 761 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 YTHDF3Q7Z739 585 aaKnown RBP20.15■□□□□ 0.82
ACTN1-220ENST00000556433 RNF128Q8TEB7 428 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 PKNOX2Q96KN3 472 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 DSCAMO60469 2012 aa20.15■□□□□ 0.82
ACTN1-220ENST00000556433 DUXAA6NLW8 204 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 ITM2AO43736 263 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 EIF4E2O60573 245 aaKnown RBP20.14■□□□□ 0.81
ACTN1-220ENST00000556433 NID1P14543 1247 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 PSMB1P20618 241 aaKnown RBP20.14■□□□□ 0.81
ACTN1-220ENST00000556433 MATN1P21941 496 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 NR1H2P55055 460 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 C21orf58P58505 322 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 RPS26P62854 115 aaKnown RBP20.14■□□□□ 0.81
ACTN1-220ENST00000556433 OR4F3Q6IEY1 312 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 ALKBH2Q6NS38 261 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF704Q6ZNC4 412 aaPredicted RBP20.14■□□□□ 0.81
ACTN1-220ENST00000556433 FCRLAQ7L513 359 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 NUFIP2Q7Z417 695 aaKnown RBP20.14■□□□□ 0.81
ACTN1-220ENST00000556433 C6orf120Q7Z4R8 191 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 TUSC5Q8IXB3 177 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 CLECL1Q8IZS7 167 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 CLEC4FQ8N1N0 589 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 TMCO5AQ8N6Q1 288 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 TOR1AIP2Q8NFQ8 470 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 OR5W2Q8NH69 310 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 PLPPR2Q96GM1 343 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 MRGPRX4Q96LA9 322 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 PPP1R36Q96LQ0 422 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 Q96MF0 132 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 TMEM109Q9BVC6 243 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 OR10A4Q9H209 315 aa20.14■□□□□ 0.81
ACTN1-220ENST00000556433 NOP53Q9NZM5 478 aaKnown RBP20.14■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF264O43296 627 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 PRKD3O94806 890 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 NTN1O95631 604 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 PLAUP00749 431 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 GPR68Q15743 365 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 PDCD2Q16342 344 aaPredicted RBP20.13■□□□□ 0.81
ACTN1-220ENST00000556433 SMU1Q2TAY7 513 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 PDZK1Q5T2W1 519 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 STEAP2Q8NFT2 490 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF524Q96C55 264 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 ARSGQ96EG1 525 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 HDHD5Q9BXW7 423 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 SERHL2Q9H4I8 314 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 AKTIPQ9H8T0 292 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms