RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 BOKQ9UMX3 212 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 SAMHD1Q9Y3Z3 626 aaKnown RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 CHCHD2Q9Y6H1 151 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 SPTBN4Q9H254 2564 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 A0A087WZY1 265 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 IGLV3-32A0A0A0MS00 114 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CENPVL1A0A0U1RR11 272 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 HTR3EA5X5Y0 456 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ANKUB1A6NFN9 424 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CPSF4LA6NMK7 179 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 G3V2T6 193 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 MAN1A2O60476 641 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SLC25A12O75746 678 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CBR3O75828 277 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CEACAM4O75871 244 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 WDPCPO95876 746 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 MT-ND1P03886 318 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 PNMTP11086 282 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF23P17027 643 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 FPR1P21462 350 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 FKBP2P26885 142 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 RYKP34925 604 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 YAP1P46937 504 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 IDH2P48735 452 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF41P51814 821 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CDH12P55289 794 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SESN3P58005 492 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 RAPSNQ13702 412 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 GANABQ14697 944 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 TRAM2Q15035 370 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CD226Q15762 336 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 COL28A1Q2UY09 1125 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 DCST1Q5T197 706 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SWT1Q5T5J6 900 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 FBXW10Q5XX13 1052 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SLC25A25Q6KCM7 469 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ULK3Q6PHR2 472 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 APOOLQ6UXV4 268 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 AMIGO2Q86SJ2 522 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 PLCZ1Q86YW0 608 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CDK20Q8IZL9 346 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 OFCC1Q8IZS5 231 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CADM2Q8N3J6 435 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 AMER2Q8N7J2 671 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 LSMEM1Q8N8F7 131 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 TMEM178AQ8NBL3 297 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ICA1LQ8NDH6 482 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 FAM71CQ8NEG0 241 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 FDCSPQ8NFU4 85 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ZCCHC14Q8WYQ9 949 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ARSGQ96EG1 525 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SLC41A3Q96GZ6 507 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SH3YL1Q96HL8 342 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 MPP4Q96JB8 637 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF597Q96LX8 424 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 JSRP1Q96MG2 331 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ALPK1Q96QP1 1244 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 FAM173AQ9BQD7 235 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SEMA6AQ9H2E6 1030 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF556Q9HAH1 456 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 NMNAT1Q9HAN9 279 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 C12orf10Q9HB07 376 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SH2D2AQ9NP31 389 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 SERINC1Q9NRX5 453 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ANKRD10Q9NXR5 420 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 B4GALT7Q9UBV7 327 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CNOT11Q9UKZ1 510 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 CHST2Q9Y4C5 530 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 TESMINQ9Y4I5 508 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 PCDHGA9Q9Y5G4 932 aaKnown RBP8.42□□□□□ -1.06
ACTN1-218ENST00000556343 ORC6Q9Y5N6 252 aa8.42□□□□□ -1.06
ACTN1-218ENST00000556343 A0A087WV48 116 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 TRAV17A0A0B4J275 112 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 A0A1W2PRQ8 180 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 SNPHO15079 494 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 FRS3O43559 492 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 PEX1O43933 1283 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 CDC40O60508 579 aaKnown RBP eCLIP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 DIRAS1O95057 198 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 CCNB2O95067 398 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 EPPINO95925 133 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ITGB2P05107 769 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 SP1P08047 785 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 CCL3P10147 92 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ANXA8P13928 327 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 CXCR1P25024 350 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 GCKP35557 465 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 EIF1P41567 113 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ACAA2P42765 397 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 SLC1A3P43003 542 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 RNF144AP50876 292 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 MAP2K6P52564 334 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF136P52737 540 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 HMGA2P52926 109 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 GAS1P54826 345 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 DSCR4P56555 118 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 HOXC5Q00444 222 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF117Q03924 483 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 PIN1Q13526 163 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms