RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ALG11Q2TAA5 492 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 C1orf189Q5VU69 101 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 NANOGP1Q8N7R0 232 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 NT5DC2Q9H857 520 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 IER3IP1Q9Y5U9 82 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 NOS1APO75052 506 aaPredicted RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 HBQ1P09105 142 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 TFPIP10646 304 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 MCATQ8IVS2 390 aaKnown RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 MFSD4AQ8N468 514 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 LILRB4Q8NHJ6 448 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 GRPEL2Q8TAA5 225 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 GPA33Q99795 319 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 ENAMQ9NRM1 1142 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 CCDC59Q9P031 241 aaKnown RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 EEF1E1O43324 174 aaKnown RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 HMGA2P52926 109 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 DLX2Q07687 328 aaPredicted RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 SSX1Q16384 188 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 NDUFAF6Q330K2 333 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 FBXO42Q6P3S6 717 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 ZNF836Q6ZNA1 936 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 GDPGP1Q6ZNW5 385 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 GID4Q8IVV7 300 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 NEDD4LQ96PU5 975 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 HINT3Q9NQE9 182 aaKnown RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 MRPL15Q9P015 296 aaKnown RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 BOLA1Q9Y3E2 137 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 LRRN3E7EW58 273 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 DSCR3O14972 297 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 P2RX6O15547 441 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 HCRTR2O43614 444 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 DNAJB6O75190 326 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 IL12BP29460 328 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 PSMB10P40306 273 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 TNFRSF4P43489 277 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 PPP1CAP62136 330 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 CRMP1Q14194 572 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 RASSF6Q6ZTQ3 369 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 GDPD3Q7L5L3 318 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 LRRN3Q9H3W5 708 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 LHX9Q9NQ69 397 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 OBP2AQ9NY56 170 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 WSB2Q9NYS7 404 aaPredicted RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 DIMT1Q9UNQ2 313 aaKnown RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 POLR1DQ9Y2S0 133 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 A0A0J9YY10 115 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 ZNF670-ZNF695F2Z2N8 137 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 SCDO00767 359 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 XKRYO14609 159 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 DRD1P21728 446 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 PRKCDQ05655 676 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 VN1R4Q7Z5H5 301 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 COMMD2Q86X83 199 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 THEM6Q8WUY1 208 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.81□□□□□ -0.2
NEK9-209ENST00000556170 ING3Q9NXR8 418 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 MUTYHQ9UIF7 546 aa13.81□□□□□ -0.2
NEK9-209ENST00000556170 TDRD6O60522 2096 aaKnown RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 WDR87Q6ZQQ6 2873 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 PLRG1O43660 514 aaKnown RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 SPNP16150 400 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 OR1D4P47884 311 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 EEF1A2Q05639 463 aaKnown RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 DECR1Q16698 335 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 LINGO2Q7L985 606 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 FAM26EQ8N5C1 309 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 ADAD1Q96M93 576 aaKnown RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 MAP3K3Q99759 626 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 BTBD2Q9BX70 525 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 TBL1XR1Q9BZK7 514 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 ZNF224Q9NZL3 707 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 TMEM5Q9Y2B1 443 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 AHCTF1Q8WYP5 2266 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 PRAMEF27A3QJZ7 478 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 CPED1A4D0V7 1026 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 MCIDASD6RGH6 385 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 KHDRBS3O75525 346 aaKnown RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 ST6GAL1P15907 406 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 PRKACAP17612 351 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 HCCSP53701 268 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 RPTNQ6XPR3 784 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 LRRC17Q8N6Y2 441 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 SLC35B4Q969S0 331 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 ZNF486Q96H40 463 aaPredicted RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 C4orf36Q96KX1 117 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 ZNF559Q9BR84 538 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 SLC22A31A6NKX4 558 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 RABIFP47224 123 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 CAPZA2P47755 286 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 OR12D2P58182 307 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 NR4A3Q92570 626 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 MRPL38Q96DV4 380 aaKnown RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 FOXN4Q96NZ1 517 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 CDCA3Q99618 268 aaPredicted RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 PIGUQ9H490 435 aa13.8□□□□□ -0.2
NEK9-209ENST00000556170 PAQR5Q9NXK6 330 aaPredicted RBP13.8□□□□□ -0.2
NEK9-209ENST00000556170 TRBV2A0A0J9YWF9 115 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms