RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 LOC100130705A0A1B0GUX0 176 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 A0A1W2PS29 197 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 FITM1A5D6W6 292 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 FAM227AF5H4B4 570 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SYT5O00445 386 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 TOX3O15405 576 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 B4GAT1O43505 415 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SPRY1O43609 319 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 HCRTR1O43613 425 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 FOXS1O43638 330 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 PLOD3O60568 738 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 LDB3O75112 727 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 COQ9O75208 318 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 OR2B3O76000 313 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 OXSR1O95747 527 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 MT-CO3P00414 261 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 AK1P00568 194 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 NELFEP18615 380 aaKnown RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 TNFRSF1BP20333 461 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 EPHA8P29322 1005 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 RYKP34925 604 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 PTGER1P34995 402 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 YAP1P46937 504 aaKnown RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 MAN2A2P49641 1150 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 DAPP51397 102 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 HMGA2P52926 109 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 HSD17B7P56937 341 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 ID2Q02363 134 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 KEAP1Q14145 624 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 GALEQ14376 348 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 NR1D2Q14995 579 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 NR0B2Q15466 257 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 ZNHIT3Q15649 155 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 MAPK11Q15759 364 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 DUSP7Q16829 419 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 ARHGAP11BQ3KRB8 267 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 AMZ1Q400G9 498 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 PDLIM3Q53GG5 364 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF311Q5JNZ3 666 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 RBM48Q5RL73 367 aaKnown RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 FAHD1Q6P587 224 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 WDR74Q6RFH5 385 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 TSEN54Q7Z6J9 526 aaKnown RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 GALNT5Q7Z7M9 940 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SLC35F3Q8IY50 421 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 GPR135Q8IZ08 494 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 OFCC1Q8IZS5 231 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 LINC00471Q8N535 108 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 Q8N9G6 341 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 CDRT4Q8N9R6 151 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 OR10G2Q8NGC3 310 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SLC9A6Q92581 669 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 HDAC2Q92769 488 aaKnown RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 FKBP10Q96AY3 582 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 ANKRD9Q96BM1 317 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 MVB12AQ96EY5 273 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 MMABQ96EY8 250 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 GIMAP5Q96F15 307 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SLC35A4Q96G79 324 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 RBM18Q96H35 190 aaKnown RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 PEX11GQ96HA9 241 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 ALPK1Q96QP1 1244 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 CCNL2Q96S94 520 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 DPYSL5Q9BPU6 564 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 NDC1Q9BTX1 674 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 RIBC2Q9H4K1 309 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 MTHFD2LQ9H903 347 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-204ENST00000555890 FANCEQ9HB96 536 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SMURF1Q9HCE7 757 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 POLE3Q9NRF9 147 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 PRTFDC1Q9NRG1 225 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 HCN3Q9P1Z3 774 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 BLOC1S6Q9UL45 172 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 POFUT2Q9Y2G5 429 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 IFT52Q9Y366 437 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 PCDHGB5Q9Y5G0 923 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 LYVE1Q9Y5Y7 322 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 HSPE1-MOB4S4R3N1 261 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 SDK2Q58EX2 2172 aa6.31□□□□□ -1.4
SLIRP-204ENST00000555890 UNC13CQ8NB66 2214 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SMIM31A0A1B0GVY4 71 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CPED1A4D0V7 1026 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ARRDC5A6NEK1 342 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TTC36A6NLP5 189 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 BCKDKO14874 412 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 UGT2B17O75795 530 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CLIC3O95833 236 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 LGI1O95970 557 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 H1F0P07305 194 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CHRM4P08173 479 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 GNAO1P09471 354 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PABPC4LP0CB38 370 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 GIMD1P0DJR0 217 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SMIM18P0DKX4 95 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ATP6V1B1P15313 513 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 FOSL1P15407 271 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TNNI3P19429 210 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms