RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 YTHDF2Q9Y5A9 579 aaKnown RBP1.17□□□□□ -2.22
SRP54-207ENST00000555535 IQANK1A0A1B0GTG1 560 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 LAD1O00515 517 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 ATP6V1G1O75348 118 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 TNFSF13O75888 250 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 TGDSO95455 350 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 PLEKP08567 350 aaPredicted RBP1.16□□□□□ -2.22
SRP54-207ENST00000555535 HMOX1P09601 288 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 SLC35G4P0C7Q5 338 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 ALPPL2P10696 532 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 PNMTP11086 282 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 CD34P28906 385 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 EMDP50402 254 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 GALK2Q01415 458 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 BTG3Q14201 252 aaPredicted RBP1.16□□□□□ -2.22
SRP54-207ENST00000555535 HECTD3Q5T447 861 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 CYS1Q717R9 158 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 GOLGA7Q7Z5G4 137 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 SERPINA12Q8IW75 414 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 WDR36Q8NI36 951 aaKnown RBP1.16□□□□□ -2.22
SRP54-207ENST00000555535 IL1F10Q8WWZ1 152 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 ATP6V0A1Q93050 837 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 ATP6V1E2Q96A05 226 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 JAKMIP1Q96N16 626 aaKnown RBP1.16□□□□□ -2.22
SRP54-207ENST00000555535 MCHR1Q99705 422 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 CBWD1Q9BRT8 395 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 TMEM121Q9BTD3 319 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 TEX13AQ9BXU3 409 aaPredicted RBP1.16□□□□□ -2.22
SRP54-207ENST00000555535 COG4Q9H9E3 785 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 COPS7BQ9H9Q2 264 aaPredicted RBP1.16□□□□□ -2.22
SRP54-207ENST00000555535 AIG1Q9NVV5 245 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 PLA2G4CQ9UP65 541 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 GMPPBQ9Y5P6 360 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 PCM1Q15154 2024 aa1.16□□□□□ -2.22
SRP54-207ENST00000555535 A0A0G2JRQ6 117 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 A0A0U1RQG5 324 aaPredicted RBP1.15□□□□□ -2.23
SRP54-207ENST00000555535 ZNF320A2RRD8 509 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 H0YL77 283 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 STX6O43752 255 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 MUC1P15941 1255 aaPredicted RBP1.15□□□□□ -2.23
SRP54-207ENST00000555535 NOVA1P51513 510 aaKnown RBP1.15□□□□□ -2.23
SRP54-207ENST00000555535 CNN1P51911 297 aaKnown RBP1.15□□□□□ -2.23
SRP54-207ENST00000555535 ARFRP1Q13795 201 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 FUT11Q495W5 492 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 C6orf120Q7Z4R8 191 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 CALHM3Q86XJ0 350 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 TMCO5AQ8N6Q1 288 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 PHYHIPQ92561 330 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 FAM213AQ9BRX8 229 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 ZWILCHQ9H900 591 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 NUFIP1Q9UHK0 495 aaKnown RBP1.15□□□□□ -2.23
SRP54-207ENST00000555535 STX8Q9UNK0 236 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 SNX5Q9Y5X3 404 aa1.15□□□□□ -2.23
SRP54-207ENST00000555535 TTC26A0AVF1 554 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 TMEM89A2RUT3 159 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 PSMA7O14818 248 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 CASKO14936 926 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 ZNF263O14978 683 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 ALOX15BO15296 676 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 SLC7A4O43246 635 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 CTDNEP1O95476 244 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 HSP90AB1P08238 724 aaKnown RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 AREGP15514 252 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 GCFC2P16383 781 aaKnown RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 XRCC1P18887 633 aaPredicted RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 EFNB2P52799 333 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 STX1BP61266 288 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 TMEM270Q6UE05 265 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 C1orf186Q6ZWK4 172 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 P4HA3Q7Z4N8 544 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 RALGPS2Q86X27 583 aaPredicted RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 SFRP1Q8N474 314 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 LINC00304Q8N9R0 145 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 NKAPP1Q8N9T2 125 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 ZCCHC13Q8WW36 166 aaKnown RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 ADPGKQ9BRR6 497 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 OSBPL11Q9BXB4 747 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 SLC5A7Q9GZV3 580 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 TMEM245Q9H330 911 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 ZNF430Q9H8G1 570 aaPredicted RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 SLC25A22Q9H936 323 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 DMAP1Q9NPF5 467 aaPredicted RBP1.14□□□□□ -2.23
SRP54-207ENST00000555535 GALPQ9UBC7 116 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 FBXW2Q9UKT8 454 aa1.14□□□□□ -2.23
SRP54-207ENST00000555535 PLA2R1Q13018 1463 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 TUBGCP6Q96RT7 1819 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 NID2Q14112 1375 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 GNSP15586 552 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 EPHX2P34913 555 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 TCF7P36402 384 aaPredicted RBP1.13□□□□□ -2.23
SRP54-207ENST00000555535 MAGEA4P43358 317 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 GNPDA1P46926 289 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 CACNG7P62955 275 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 HERVK_113P63132 956 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 ERVK-8P63133 956 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 GFPT1Q06210 699 aaPredicted RBP1.13□□□□□ -2.23
SRP54-207ENST00000555535 WASHC5Q12768 1159 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 NME3Q13232 169 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 SLMAPQ14BN4 828 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 AGKQ53H12 422 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms