RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SMARCD3Q6STE5 483 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 LAPTM4BQ86VI4 370 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 GRAMD2AQ8IUY3 354 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 ZFP41Q8N8Y5 198 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 FAM83FQ8NEG4 500 aaPredicted RBP22.41■■□□□ 1.18
TMEM260-207ENST00000555497 OR9Q1Q8NGQ5 310 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 OTULINQ96BN8 352 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 ARHGAP9Q9BRR9 750 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 HCAR1Q9BXC0 346 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 RERGLQ9H628 205 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 SNTG1Q9NSN8 517 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 LRIT1Q9P2V4 623 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 SIGLEC7Q9Y286 467 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 MED31Q9Y3C7 131 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 MAU2Q9Y6X3 613 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 ASXL3Q9C0F0 2248 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 ZC3H12DA2A288 527 aaKnown RBP22.41■■□□□ 1.18
TMEM260-207ENST00000555497 SYNDIG1LA6NDD5 238 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 NPIPB9F8W1W9 429 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 TSPAN19P0C672 248 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 TPBGQ13641 420 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 GARNL3Q5VVW2 1013 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 CXXC5Q7LFL8 322 aaKnown RBP22.41■■□□□ 1.18
TMEM260-207ENST00000555497 LYSMD2Q8IV50 215 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 PDE7BQ9NP56 450 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 C14orf105Q9NVL8 296 aa22.41■■□□□ 1.18
TMEM260-207ENST00000555497 CACNA1IQ9P0X4 2223 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 TBX1O43435 398 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 CLPSP04118 112 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 GUSBP08236 651 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 CD1CP29017 333 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 FUT7Q11130 342 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 NDUFAF6Q330K2 333 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 C14orf28Q4W4Y0 310 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 FBXL21Q9UKT6 434 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 MRPS17Q9Y2R5 130 aaKnown RBP22.4■■□□□ 1.18
TMEM260-207ENST00000555497 RNF215Q9Y6U7 377 aa22.4■■□□□ 1.18
TMEM260-207ENST00000555497 HEATR5AQ86XA9 2040 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 A0A075B6Q4 140 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 TRAV27A0A087WT01 109 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 STK25O00506 426 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 CHP2O43745 196 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 PRAMEF2O60811 474 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 SOX30O94993 753 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 BCKDHBP21953 392 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 GTF2E2P29084 291 aaKnown RBP22.39■■□□□ 1.18
TMEM260-207ENST00000555497 CTBP2P56545 445 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 HNRNPKP61978 463 aaKnown RBP eCLIP22.39■■□□□ 1.18
TMEM260-207ENST00000555497 ZNF141Q15928 474 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 C22orf42Q6IC83 251 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 PLEKHG7Q6ZR37 379 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 CCDC190Q86UF4 302 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 SLC22A16Q86VW1 577 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 LNX2Q8N448 690 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 SIRT6Q8N6T7 355 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 ZNF615Q8N8J6 731 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 OR10A5Q9H207 317 aa22.39■■□□□ 1.18
TMEM260-207ENST00000555497 CAB39Q9Y376 341 aaPredicted RBP22.39■■□□□ 1.18
TMEM260-207ENST00000555497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 IGHA1P01876 353 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 ZNF45Q02386 682 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 TMEM44Q2T9K0 475 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 PLK5Q496M5 336 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 OR52L1Q8NGH7 329 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 TM9SF2Q99805 663 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 ISYNA1Q9NPH2 558 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 TOR4AQ9NXH8 423 aa22.39■■□□□ 1.17
TMEM260-207ENST00000555497 BLACEA4D250 179 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 FITM1A5D6W6 292 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 TMEM221A6NGB7 291 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ZNF749O43361 778 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 PTP4A3O75365 173 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 IFNA16P05015 189 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 CLEC2LP0C7M8 214 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 SAGP10523 405 aaPredicted RBP22.38■■□□□ 1.17
TMEM260-207ENST00000555497 STARD6P59095 220 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 CSTF1Q05048 431 aaKnown RBP22.38■■□□□ 1.17
TMEM260-207ENST00000555497 MXD1Q05195 221 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 FGFBP1Q14512 234 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 STEAP3Q658P3 488 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ZSCAN1Q8NBB4 408 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 OR4C3Q8NH37 302 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 OR51A7Q8NH64 312 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ADAMTS18Q8TE60 1221 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 LMF1Q96S06 567 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ZNF426Q9BUY5 554 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 PCED1AQ9H1Q7 454 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 TPK1Q9H3S4 243 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ERVK13-1Q9NX77 482 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 H2AFY2Q9P0M6 372 aaPredicted RBP22.38■■□□□ 1.17
TMEM260-207ENST00000555497 SEC16AO15027 2179 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 TP53BP1Q12888 1972 aaPredicted RBP22.38■■□□□ 1.17
TMEM260-207ENST00000555497 J3QRE1 110 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 MSL3P1P0C860 447 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 BMP7P18075 431 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ETV6P41212 452 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 HSD17B7P56937 341 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 ZNF791Q3KP31 576 aaPredicted RBP22.38■■□□□ 1.17
TMEM260-207ENST00000555497 FCRLBQ6BAA4 426 aa22.38■■□□□ 1.17
TMEM260-207ENST00000555497 BMP8AQ7Z5Y6 402 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms