RNA–Protein interactions for RNA: ENST00000555225.5

SDR39U1-210, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 769 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-210ENST00000555225 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-210ENST00000555225 ACAD8Q9UKU7 415 aa17.1■□□□□ 0.33
SDR39U1-210ENST00000555225 TEP1Q99973 2627 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 C7orf72A4D263 438 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 NPIPA2E9PIF3 369 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 NPIPA3F8WFD2 350 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 GMFGO60234 142 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 SERPINB7O75635 380 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 NUDT14O95848 222 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 UBTFL6P0CB48 400 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 EIF1P41567 113 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 GFRA1P56159 465 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 SKP2Q13309 424 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 INTS11Q5TA45 600 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 ERICH5Q6P6B1 374 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 ENPP6Q6UWR7 440 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 PTOV1Q86YD1 416 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 PM20D2Q8IYS1 436 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 TMCO5AQ8N6Q1 288 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 FAM71CQ8NEG0 241 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 ABTB1Q969K4 478 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 SFXN2Q96NB2 322 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 STOML1Q9UBI4 398 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 SLC6A5Q9Y345 797 aa17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 RP1L1Q8IWN7 2480 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-210ENST00000555225 CREBBPQ92793 2442 aa17.08■□□□□ 0.33
SDR39U1-210ENST00000555225 PRORSD1PA6NEY8 169 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 DNAJA2O60884 412 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 SEMA7AO75326 666 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 CYP7B1O75881 506 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 TPOP07202 933 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 HOXD4P09016 255 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 PABPC4LP0CB38 370 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 BMP7P18075 431 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 PGCP20142 388 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 CA7P43166 264 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 SLC6A8P48029 635 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 RNF144AP50876 292 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 GZMMP51124 257 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 SF3B4Q15427 424 aaKnown RBP eCLIP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 VMACQ2NL98 169 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 GXYLT1Q4G148 440 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 ZNF311Q5JNZ3 666 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 RNF220Q5VTB9 566 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 RAET1LQ5VY80 246 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 C8orf82Q6P1X6 216 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 ARSKQ6UWY0 536 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 CALHM3Q86XJ0 350 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 ZZZ3Q8IYH5 903 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 ZNF440Q8IYI8 595 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 BHLHE22Q8NFJ8 381 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 GPR119Q8TDV5 335 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 RELTQ969Z4 430 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 REXO5Q96IC2 774 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 TIMP4Q99727 224 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 UGT2B28Q9BY64 529 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 MED17Q9NVC6 651 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 NDE1Q9NXR1 346 aa17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 ZNF443Q9Y2A4 671 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 RPH3AQ9Y2J0 694 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 GPC6Q9Y625 555 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-210ENST00000555225 HIVEP3Q5T1R4 2406 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 TRGV8A0A0C4DH27 118 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 CDHR4A6H8M9 788 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 OIP5O43482 229 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 ESRRAP11474 423 aaPredicted RBP17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 CPN1P15169 458 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 ZNF17P17021 662 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 ADH6P28332 368 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 PCGF2P35227 344 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 B3GALT5-AS1P59052 145 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 CRYZQ08257 329 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 VEZF1Q14119 521 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 BCL2A1Q16548 175 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 TMEM44Q2T9K0 475 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 MRPL2Q5T653 305 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 HMGN2P46Q86SG4 172 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 PATL1Q86TB9 770 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 VRK2Q86Y07 508 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 DOLPP1Q86YN1 238 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 GRAMD2AQ8IUY3 354 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 SLC15A3Q8IY34 581 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 GTPBP8Q8N3Z3 284 aaPredicted RBP17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 TMEM234Q8WY98 164 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 ZNF583Q96ND8 569 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 TP63Q9H3D4 680 aaPredicted RBP17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 VDAC3Q9Y277 283 aa17.07■□□□□ 0.32
SDR39U1-210ENST00000555225 A1L4Q6 167 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 OR2M5A3KFT3 312 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 CLDN24A6NM45 220 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 FIGNL2A6NMB9 653 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 AHRRA9YTQ3 701 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 WDR1O75083 606 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 GABRA1P14867 456 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 UQCRBP14927 111 aa17.06■□□□□ 0.32
SDR39U1-210ENST00000555225 PRKAR1BP31321 381 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms