RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 APRTP07741 180 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MBL2P11226 248 aaPredicted RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 AHCYP23526 432 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TMOD1P28289 359 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 GABRR2P28476 465 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MARCKSP29966 332 aaPredicted RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TNFSF9P41273 254 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MAGEA9P43362 315 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TNFRSF4P43489 277 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ACADSBP45954 432 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SLC1A6P48664 564 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 PITPNBP48739 271 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 LIMK2P53671 638 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 PAX8Q06710 450 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SPAG1Q07617 926 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 FASTKQ14296 549 aaKnown RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 EXOSC7Q15024 291 aaKnown RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 GLIPR1L2Q4G1C9 344 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 GPAT3Q53EU6 434 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MUC21Q5SSG8 566 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 DCAF12Q5T6F0 453 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 LCE3AQ5TA76 89 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 DDI2Q5TDH0 399 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 HES3Q5TGS1 186 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ATF7IP2Q5U623 682 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SDHAF4Q5VUM1 108 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 NKAIN2Q5VXU1 208 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 PAQR6Q6TCH4 344 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 CWC27Q6UX04 472 aaKnown RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 Q6ZRG5 221 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 LPCAT2Q7L5N7 544 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MIER3Q7Z3K6 550 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ITIH5Q86UX2 942 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 CATSPER3Q86XQ3 398 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ERC1Q8IUD2 1116 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 PHC2Q8IXK0 858 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 LEMD2Q8NC56 503 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ICA1LQ8NDH6 482 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 OR1B1Q8NGR6 318 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 KIAA1524Q8TCG1 905 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ESR2Q92731 530 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SMARCD2Q92925 531 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 NABP1Q96AH0 204 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ELSPBP1Q96BH3 223 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TCEANC2Q96MN5 208 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 RCHY1Q96PM5 261 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TAAR6Q96RI8 345 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SPXQ9BT56 116 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 DCTN5Q9BTE1 182 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 LRRCC1Q9C099 1032 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 CARD9Q9H257 536 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 PRORYQ9H606 182 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SP140LQ9H930 580 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 POLD4Q9HCU8 107 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ERVK-18Q9QC07 812 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 COPS7AQ9UBW8 275 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 FAM153AQ9UHL3 310 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 DIMT1Q9UNQ2 313 aaKnown RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 RPH3AQ9Y2J0 694 aaPredicted RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 AUP1Q9Y679 476 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MYBPHLA2RUH7 354 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 WASH3PC4AMC7 463 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SGK1O00141 431 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HIP1O00291 1037 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 REC8O95072 547 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TRIM16O95361 564 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SYNGR4O95473 234 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 KLF8O95600 359 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HPRP00739 348 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 IGHG1P01857 330 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SLC4A1P02730 911 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ALPPP05187 535 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HIST1H2AGP0C0S8 130 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ALPPL2P10696 532 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 APCP25054 2843 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SCN1AP35498 2009 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 MYH11P35749 1972 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ETV5P41161 510 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 MTIF2P46199 727 aaKnown RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CSNK1EP49674 416 aaKnown RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ATP4BP51164 291 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SLC12A3P55017 1021 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SSTP61278 116 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LMO4P61968 165 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CD300CQ08708 224 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 FCHO2Q0JRZ9 810 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 WASHC5Q12768 1159 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 FRMPD4Q14CM0 1322 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 KARSQ15046 597 aaKnown RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 PDK1Q15118 436 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TGIF1Q15583 401 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CARTPTQ16568 116 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SNAI3Q3KNW1 292 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 KRTAP13-3Q3SY46 172 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 POM121L1PQ3SYA9 428 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CMPK2Q5EBM0 449 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 FAM182AQ5T1J6 154 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF343Q6P1L6 599 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 GPRIN3Q6ZVF9 776 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms