RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SYNGR4O95473 234 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 TGFAP01135 160 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 TUBBP07437 444 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PABPC4LP0CB38 370 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 ITGA2P17301 1181 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CSNK2A2P19784 350 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PTNP21246 168 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CD40P25942 277 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 KRT20P35900 424 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 SRP14P37108 136 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 SLC6A8P48029 635 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 EFNA4P52798 201 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PNLIPRP2P54317 469 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 GAS1P54826 345 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CDH11P55287 796 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 C21orf58P58505 322 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 TAS2R39P59534 338 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PHEXP78562 749 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 ILF2Q12905 390 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CUL3Q13618 768 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 DDX39BQ13838 428 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 GANABQ14697 944 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 P2RY6Q15077 328 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 KCTD19Q17RG1 926 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PRICKLE4Q2TBC4 344 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 FBXO48Q5FWF7 155 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PPP4R4Q6NUP7 873 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 MFSD12Q6NUT3 480 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 IL17RELQ6ZVW7 336 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 LRRC70Q7Z2Q7 622 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 TBC1D1Q86TI0 1168 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CCDC25Q86WR0 208 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 NUDT13Q86X67 352 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 GABRG1Q8N1C3 465 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 FBXL14Q8N1E6 418 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 ZNF525Q8N782 197 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 FADS6Q8N9I5 356 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 OR2M3Q8NG83 312 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 OR52B6Q8NGF0 335 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 OR5M1Q8NGP8 315 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 MSI2Q96DH6 328 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 MUCL1Q96DR8 90 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 HBEGFQ99075 208 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 DHRS9Q9BPW9 319 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CACNG6Q9BXT2 260 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 ZNF717Q9BY31 904 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 ITPAQ9BY32 194 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 TRIM5Q9C035 493 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 BRINP2Q9C0B6 783 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 TSPY26PQ9H489 355 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 FOLH1BQ9HBA9 442 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 POPDC3Q9HBV1 291 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 MOCS1Q9NZB8 636 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 CD274Q9NZQ7 290 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 MED11Q9P086 117 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 XPR1Q9UBH6 696 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 ZNF639Q9UID6 485 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PSME2Q9UL46 239 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 MCTS1Q9ULC4 181 aaKnown RBP4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PLLPQ9Y342 182 aa4.26□□□□□ -1.73
ATXN3-229ENST00000554672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.734e-12■■■□□ 18.3
ATXN3-229ENST00000554672 ARHGAP21Q5T5U3 1957 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CENPVL1A0A0U1RR11 272 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 GOLGA6L10A6NI86 522 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 B4DXG7 233 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 E7EQL1 145 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 H0YIV9 168 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 H7C417 338 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 K7EPI3 171 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 FOXE1O00358 373 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 ADAMDEC1O15204 470 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 GUCY1B2O75343 617 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 ABHD16AO95870 558 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 ADAP00813 363 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 GBAP04062 536 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 S100BP04271 92 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 ATP1B1P05026 303 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 APEHP13798 732 aaKnown RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CREB1P16220 341 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 IL12BP29460 328 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 APOBEC3AP31941 199 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CLK3P49761 638 aaKnown RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 EMDP50402 254 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 PDLIM4P50479 330 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 FABP6P51161 128 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 SLC12A2P55011 1212 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 ATP6V0D1P61421 351 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CHRNB3Q05901 458 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 ITGADQ13349 1161 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 GGTLC2Q14390 218 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 EXOSC7Q15024 291 aaKnown RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 TSC22D1Q15714 1073 aa4.25□□□□□ -1.73
ATXN3-229ENST00000554672 PDCD2Q16342 344 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 TRMT12Q53H54 448 aaKnown RBP4.25□□□□□ -1.73
ATXN3-229ENST00000554672 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms