RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TCRBV5S1A1TA0A578 114 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 CTDSP2O14595 271 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 TMEM225BP0DP42 221 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 PRLHRP49683 370 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 NHSL2Q5HYW2 709 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 C3P1Q6ZMU1 363 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 HTR3DQ70Z44 454 aa13.11□□□□□ -0.31
VTI1B-204ENST00000554659 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 TNFSF12O43508 249 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 CSF2RAP15509 400 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SLC2A5P22732 501 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 DAPP51397 102 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 DLX5P56178 289 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 FXYD4P59646 89 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 MC2RQ01718 297 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 KIR2DS3Q14952 304 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 KCNJ8Q15842 424 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 AGAP7PQ5VUJ5 663 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF480Q8WV37 535 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 PRRT1Q99946 306 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 B4GALT7Q9UBV7 327 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SCML1Q9UN30 329 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 OR6C65A6NJZ3 312 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SRPX2O60687 465 aaPredicted RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 BMP4P12644 408 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 RABIFP47224 123 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 NFATC4Q14934 902 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 NSDHLQ15738 373 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SLC5A12Q1EHB4 618 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 MORN1Q5T089 497 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 PSORS1C1Q9UIG5 152 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 FOXE1O00358 373 aaPredicted RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 OIP5O43482 229 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 EDIL3O43854 480 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 C1orf105O95561 183 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 RAB6AP20340 208 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 CASP3P42574 277 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 RGRP47804 291 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 GIPRP48546 466 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 HBA1P69905 142 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 CDS1Q92903 461 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SGCZQ96LD1 299 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 GPR174Q9BXC1 333 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 ALOXE3Q9BYJ1 711 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 MKRN2Q9H000 416 aaKnown RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 PRMT8Q9NR22 394 aaPredicted RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 FAM171A2A8MVW0 826 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 ATG12O94817 140 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 GIFP27352 417 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 GABRA5P31644 462 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 DUSP3P51452 185 aaPredicted RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 PELI3Q8N2H9 469 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 OR7G1Q8NGA0 311 aa13.1□□□□□ -0.31
VTI1B-204ENST00000554659 USP36Q9P275 1121 aaKnown RBP13.1□□□□□ -0.31
VTI1B-204ENST00000554659 hCG_1807616A0A1W2PRN6 198 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 LATO43561 262 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 TP53P04637 393 aaPredicted RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 VIPR2P41587 438 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 DAP3P51398 398 aaKnown RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 CTSCP53634 463 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 ENTPD8Q5MY95 495 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 LCN10Q6JVE6 187 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 GPR137CQ8N3F9 429 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 SLC39A13Q96H72 371 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 INTS14Q96SY0 518 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 MED17Q9NVC6 651 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 GABRPO00591 440 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 OR7A17O14581 309 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 GPR50Q13585 617 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 HORMAD2Q8N7B1 307 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 RPL3LQ92901 407 aaKnown RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 LMF2Q9BU23 707 aaKnown RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 NOX3Q9HBY0 568 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF443Q9Y2A4 671 aaPredicted RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 PDE4DIPQ5VU43 2346 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 SGCEO43556 437 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 RAB4AP20338 218 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 GLO1Q04760 184 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 TSPAN31Q12999 210 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 PTPRRQ15256 657 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 OR2T11Q8NH01 316 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 OR7D2Q96RA2 312 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 LHX3Q9UBR4 397 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF223Q9UK11 482 aaPredicted RBP13.09□□□□□ -0.31
VTI1B-204ENST00000554659 ADAM29Q9UKF5 820 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 HHLA1C9JL84 531 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
VTI1B-204ENST00000554659 H0YIV9 168 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms