RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 APCDD1Q8J025 514 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SIRT6Q8N6T7 355 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC185Q8N715 623 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 EXD3Q8N9H8 876 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OR2A12Q8NGT7 310 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FBXO25Q8TCJ0 367 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GLYATL2Q8WU03 294 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FAM172AQ8WUF8 416 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 C1orf54Q8WWF1 131 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TFAP2BQ92481 460 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 NSMAFQ92636 917 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ARRDC3Q96B67 414 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 LCORQ96JN0 433 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 BMFQ96LC9 184 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FOXN4Q96NZ1 517 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HAPLN3Q96S86 360 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HOPXQ9BPY8 73 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SOX7Q9BT81 388 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CHRDL1Q9BU40 450 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SPRY4Q9C004 299 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OR52A5Q9H2C5 316 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SRD5A3Q9H8P0 318 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 UBTD1Q9HAC8 227 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 BCO1Q9HAY6 547 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 S100A14Q9HCY8 104 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SLCO1B3Q9NPD5 702 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TIGARQ9NQ88 270 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 BEX4Q9NWD9 120 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ALKBH4Q9NXW9 302 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SLC12A6Q9UHW9 1150 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MAGEL2Q9UJ55 1249 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 UBR5O95071 2799 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 APC2O95996 2303 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 METTL21EPA6NDL7 271 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 DUXAA6NLW8 204 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SERPINE3A8MV23 424 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 F5H5T6 163 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PFDN6O15212 129 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ZZEF1O43149 2961 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ENTPD5O75356 428 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 BANF1O75531 89 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CBX6O95503 412 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MT-ND1P03886 318 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ERBB2P04626 1255 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 IFNA16P05015 189 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SCG5P05408 212 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GUSBP08236 651 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HCKP08631 526 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 G6PDP11413 515 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GP1BBP13224 206 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ACP5P13686 325 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ENO3P13929 434 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MTHFD2P13995 350 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 IL7RP16871 459 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 RBMS1P29558 406 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TYK2P29597 1187 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PPP2R1BP30154 601 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PCK1P35558 622 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 UGT2B10P36537 528 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FMO5P49326 533 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CNN1P51911 297 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 F2RL1P55085 397 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 UBE2KP61086 200 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CDH18Q13634 790 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TRAM2Q15035 370 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HIF1AQ16665 826 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CBWD6Q4V339 395 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CBWD3Q5JTY5 395 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CBWD5Q5RIA9 395 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OTUD1Q5VV17 481 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 DENND2CQ68D51 928 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 DGAT2L7PQ6IED9 249 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TEX38Q6PEX7 206 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 KCNIP4Q6PIL6 250 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF571Q7Z3V5 609 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 MARCH9Q86YJ5 346 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF595Q8IYB9 648 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FAM47BQ8NA70 645 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM104Q8NE00 496 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OR4D10Q8NGI6 311 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OR6X1Q8NH79 312 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 RNASE11Q8TAA1 199 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 CREB3L1Q96BA8 519 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ORAI1Q96D31 301 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 RCC1LQ96I51 464 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 PCDHB18PQ96TA0 734 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 C17orf62Q9BQA9 187 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 BDH2Q9BUT1 245 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 SPATA5L1Q9BVQ7 753 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 DDA1Q9BW61 102 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 C1QTNF7Q9BXJ2 289 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 OR2B2Q9GZK3 357 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 GSX1Q9H4S2 264 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF768Q9H5H4 540 aaKnown RBP2.51□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM231Q9H6L2 316 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 LYRM4Q9HD34 91 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 FZD3Q9NPG1 666 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 ZDHHC3Q9NYG2 299 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 HSPB7Q9UBY9 170 aa2.51□□□□□ -2.01
PRPF39-206ENST00000554429 NKX1-2Q9UD57 310 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms