RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HDHD5Q9BXW7 423 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 ROPN1BQ9BZX4 212 aaPredicted RBP16.75■□□□□ 0.27
CPSF2-203ENST00000554290 L2HGDHQ9H9P8 463 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 ROPN1Q9HAT0 212 aaPredicted RBP16.75■□□□□ 0.27
CPSF2-203ENST00000554290 GPATCH2Q9NW75 528 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 LGALS13Q9UHV8 139 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 CARD8Q9Y2G2 431 aa16.75■□□□□ 0.27
CPSF2-203ENST00000554290 H7C1Q1 480 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 MAD2L1Q13257 205 aaPredicted RBP16.74■□□□□ 0.27
CPSF2-203ENST00000554290 TMEM176BQ3YBM2 270 aaPredicted RBP16.74■□□□□ 0.27
CPSF2-203ENST00000554290 CBLN3Q6UW01 205 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF704Q6ZNC4 412 aaPredicted RBP16.74■□□□□ 0.27
CPSF2-203ENST00000554290 WFDC8Q8IUA0 241 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 PPP1R14CQ8TAE6 165 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 TMEM171Q8WVE6 324 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 PLPPR2Q96GM1 343 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 GSX2Q9BZM3 304 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 BHLHE41Q9C0J9 482 aaPredicted RBP16.74■□□□□ 0.27
CPSF2-203ENST00000554290 GP6Q9HCN6 339 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 ICAM5Q9UMF0 924 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 DTNAQ9Y4J8 743 aa16.74■□□□□ 0.27
CPSF2-203ENST00000554290 NPIPA5A0A0B4J1W7 369 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 NPIPA7E9PJI5 369 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 TMCC2O75069 709 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 SKAP2O75563 359 aaPredicted RBP16.73■□□□□ 0.27
CPSF2-203ENST00000554290 PRKD3O94806 890 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 NPIPA8P0DM63 369 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 SHC1P29353 583 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 KRTCAP2Q8N6L1 136 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF614Q8N883 585 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 GPR119Q8TDV5 335 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 ABHD3Q8WU67 409 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 ARL8AQ96BM9 186 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 MRGPRX4Q96LA9 322 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 DUSP26Q9BV47 211 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 KLHL13Q9P2N7 655 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 ZDHHC2Q9UIJ5 367 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 KCNE3Q9Y6H6 103 aa16.73■□□□□ 0.27
CPSF2-203ENST00000554290 DUXAA6NLW8 204 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 OIP5O43482 229 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 EFNA2O43921 213 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 EIF4E2O60573 245 aaKnown RBP16.72■□□□□ 0.27
CPSF2-203ENST00000554290 LY6G6DO95868 133 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 BPGMP07738 259 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 PTH2RP49190 550 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.72■□□□□ 0.27
CPSF2-203ENST00000554290 FCRLAQ7L513 359 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 TUSC5Q8IXB3 177 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 RIMKLAQ8IXN7 391 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 SLC43A2Q8N370 569 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF611Q8N823 705 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 TOR1AIP2Q8NFQ8 470 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 OR5W2Q8NH69 310 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 OR5AK3PQ8NH89 298 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 OR7D2Q96RA2 312 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 TACO1Q9BSH4 297 aaKnown RBP16.72■□□□□ 0.27
CPSF2-203ENST00000554290 SRXN1Q9BYN0 137 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 CXorf56Q9H5V9 222 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 ANKZF1Q9H8Y5 726 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 NGBQ9NPG2 151 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 NAV3Q8IVL0 2385 aa16.72■□□□□ 0.27
CPSF2-203ENST00000554290 NPIPB9F8W1W9 429 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 HS3ST1O14792 307 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 SMAD7O15105 426 aaKnown RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF264O43296 627 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 YES1P07947 543 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 UBL4AP11441 157 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 NID1P14543 1247 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 PRKCAP17252 672 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 SLC7A1P30825 629 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 ARRB2P32121 409 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 SOAT1P35610 550 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 RNF144AP50876 292 aaPredicted RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 C21orf58P58505 322 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 HBA1P69905 142 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 SELENBP1Q13228 472 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 TOMM34Q15785 309 aaPredicted RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 PGS1Q32NB8 556 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 ALKBH2Q6NS38 261 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 TFAP2EQ6VUC0 442 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 CIARTQ8N365 385 aaPredicted RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 TMCO5AQ8N6Q1 288 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 RFWD2Q8NHY2 731 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 ZFP90Q8TF47 636 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 NUDT8Q8WV74 236 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 S100PBPQ96BU1 408 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 ARSGQ96EG1 525 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 SDF2Q99470 211 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 USB1Q9BQ65 265 aaKnown RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 TMEM204Q9BSN7 226 aa16.71■□□□□ 0.27
CPSF2-203ENST00000554290 NOP53Q9NZM5 478 aaKnown RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 ZNF469Q96JG9 3925 aaPredicted RBP16.71■□□□□ 0.27
CPSF2-203ENST00000554290 NTN1O95631 604 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 AK1P00568 194 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 PLAUP00749 431 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 G6PDP11413 515 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 PAX1P15863 534 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 IL32P24001 234 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 CCR4P51679 360 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms