RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ANPEPP15144 967 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF20P17024 532 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ATP6V1B2P21281 511 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 IL12BP29460 328 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PRKAR1BP31321 381 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 OTX2P32243 289 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 GCKP35557 465 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 KCNJ5P48544 419 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 NR0B1P51843 470 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ATP12AP54707 1039 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CLDN6P56747 220 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PCOLCEQ15113 449 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 RCN1Q15293 331 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 GPR68Q15743 365 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF141Q15928 474 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CR1LQ2VPA4 569 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FLYWCH1Q4VC44 716 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 LIN52Q52LA3 116 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CT45A2Q5DJT8 189 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SLC35F1Q5T1Q4 408 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PLAG1Q6DJT9 500 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 JMJD6Q6NYC1 403 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 DHRS4L2Q6PKH6 230 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 OPN5Q6U736 354 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 DGAT2L6Q6ZPD8 337 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF550Q7Z398 422 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 NUP54Q7Z3B4 507 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PIWIL3Q7Z3Z3 882 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ZDHHC21Q8IVQ6 265 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 MISPQ8IVT2 679 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CMIPQ8IY22 773 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SLC34A3Q8N130 599 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 LINC00471Q8N535 108 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 BCORP1Q8N888 145 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ANKFN1Q8N957 763 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 OR11G2Q8NGC1 345 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 OR52P1PQ8NH57 321 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ELP5Q8TE02 316 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 DOK4Q8TEW6 326 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PYDC1Q8WXC3 89 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 GEMIN6Q8WXD5 167 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 THAP4Q8WY91 577 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PIK3R3Q92569 461 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FGF11Q92914 225 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SLC35B4Q969S0 331 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ADIPOR1Q96A54 375 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SDCCAG3Q96C92 435 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 TMCO6Q96DC7 493 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 RMND5BQ96G75 393 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CENPNQ96H22 339 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 IMMP1LQ96LU5 166 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF354BQ96LW1 612 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 COL21A1Q96P44 957 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 BTBD9Q96Q07 612 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 GAL3ST4Q96RP7 486 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 TREX2Q9BQ50 279 aaPredicted RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 CHID1Q9BWS9 393 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 OSBPL10Q9BXB5 764 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ITPAQ9BY32 194 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 POLR2J2Q9GZM3 115 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 WWTR1Q9GZV5 400 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF350Q9GZX5 532 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 POLR2J3Q9H1A7 115 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SLC38A1Q9H2H9 487 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 ANKRA2Q9H9E1 313 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 MMP25Q9NPA2 562 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 IL1RAPQ9NPH3 570 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 UBQLN4Q9NRR5 601 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 DNAJB9Q9UBS3 223 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 TEKT2Q9UIF3 430 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FBXL7Q9UJT9 491 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 MKLN1Q9UL63 735 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 USP22Q9UPT9 525 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SLC35A3Q9Y2D2 325 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 YARS2Q9Y2Z4 477 aaKnown RBP4.61□□□□□ -1.67
VTI1B-202ENST00000553619 NPFFR2Q9Y5X5 522 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 KCNE3Q9Y6H6 103 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 SDK2Q58EX2 2172 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 FAM186AA6NE01 2351 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PIEZO1Q92508 2521 aa4.61□□□□□ -1.67
VTI1B-202ENST00000553619 PRUNE2Q8WUY3 3088 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 EP300Q09472 2414 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 IGHV3-20A0A0C4DH32 117 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TRBV11-1A0A0K0K1C0 115 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 A0A1W2PNU3 283 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 A0A1W2PQD3 144 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 GXYLT2A0PJZ3 443 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 OR6C70A6NIJ9 312 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 AGAP5A6NIR3 686 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SOCS6O14544 535 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 ADAMDEC1O15204 470 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 CLOCKO15516 846 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 PRODHO43272 600 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 EIF4E2O60573 245 aaKnown RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 FCMRO60667 390 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 DPM1O60762 260 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SEC24DO94855 1032 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SERPINA7P05543 415 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 CHRM4P08173 479 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms