RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 MC1RQ01726 317 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CNTN1Q12860 1018 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 RCN2Q14257 317 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CAPRIN1Q14444 709 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 FASTKD3Q14CZ7 662 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 EFTUD2Q15029 972 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 NECTIN1Q15223 517 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TRADDQ15628 312 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 GTDC1Q4AE62 458 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 WDR38Q5JTN6 314 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TCHHL1Q5QJ38 904 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 THEM4Q5T1C6 240 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 C1orf146Q5VVC0 180 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SEL1L3Q68CR1 1132 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 ITPRIPL1Q6GPH6 555 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SLC39A4Q6P5W5 647 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 Q75L30 129 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 ENOSF1Q7L5Y1 443 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 ABI3BPQ7Z7G0 1075 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CCDC190Q86UF4 302 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 PARGQ86W56 976 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CDKL3Q8IVW4 592 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 PHC2Q8IXK0 858 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CLEC4FQ8N1N0 589 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 RIBC1Q8N443 379 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 AVL9Q8NBF6 648 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SLC38A9Q8NBW4 561 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 OR52N1Q8NH53 320 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 CLHC1Q8NHS4 586 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 RAB3IL1Q8TBN0 382 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 MCOLN3Q8TDD5 553 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TM9SF4Q92544 642 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 BORCS5Q969J3 196 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM159Q96B96 161 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 OXNAD1Q96HP4 312 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 PLIN2Q99541 437 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 C17orf62Q9BQA9 187 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 MRPL45Q9BRJ2 306 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SLC25A23Q9BV35 468 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 BARHL1Q9BZE3 327 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 ELOVL4Q9GZR5 314 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 NMUR1Q9HB89 426 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SPACA1Q9HBV2 294 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SLC35C2Q9NQQ7 365 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 DDX19AQ9NUU7 478 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 NUDT15Q9NV35 164 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 GDAP2Q9NXN4 497 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 AKAP7Q9P0M2 348 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 APOBEC3BQ9UH17 382 aaKnown RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 GNPTGQ9UJJ9 305 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 PILRAQ9UKJ1 303 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SNX6Q9UNH7 406 aa4.38□□□□□ -1.71
ATXN3-218ENST00000553309 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-218ENST00000553309 SPTY2D1-AS1A0A0U1RR47 76 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 A0A1W2PPI3 338 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM210A6NLX4 147 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 SIGLEC16A6NMB1 481 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 EVPLLA8MZ36 301 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 BLOC1S5-TXNDC5H3BN57 136 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 H7C0S8 307 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 CCDC22O60826 627 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 PTP4A3O75365 173 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM63AO94886 807 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 CDK14O94921 469 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 HIST1H2ABP04908 130 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 IFNAR1P17181 557 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 RAB4AP20338 218 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 HIST1H2ADP20671 130 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 HNRNPA2B1P22626 353 aaKnown RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 MAPK3P27361 379 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 RRM2P31350 389 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 CDH5P33151 784 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 BMI1P35226 326 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 CSKP41240 450 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 CCL11P51671 97 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 PSMD4P55036 377 aaKnown RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 NUP107P57740 925 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 YWHAEP62258 255 aaKnown RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 NAB1Q13506 487 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ART3Q13508 389 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 KIR2DS3Q14952 304 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ARHGAP19Q14CB8 494 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 KYAT1Q16773 422 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 DUSP7Q16829 419 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 LRRC36Q1X8D7 754 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 TECRLQ5HYJ1 363 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 TEX30Q5JUR7 227 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ARHGAP17Q68EM7 881 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 GPR139Q6DWJ6 353 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 GLDNQ6ZMI3 551 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 HIST3H2AQ7L7L0 130 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 HDDC2Q7Z4H3 204 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 HPS6Q86YV9 775 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ERI1Q8IV48 349 aaKnown RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 VSTM4Q8IW00 320 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 CLYBLQ8N0X4 340 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 PYROXD2Q8N2H3 581 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 GCSAMQ8N6F7 178 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms