RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 C10orf105Q8TEF2 133 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 ZFP90Q8TF47 636 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 FAM168AQ92567 244 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-209ENST00000553308 MUCL1Q96DR8 90 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 GIMAP5Q96F15 307 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 MS4A4EQ96PG1 132 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF300Q96RE9 604 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-209ENST00000553308 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
SYNE2-209ENST00000553308 PSD2Q9BQI7 771 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 CDC42EP4Q9H3Q1 356 aaKnown RBP8.02□□□□□ -1.13
SYNE2-209ENST00000553308 CHODLQ9H9P2 273 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 BCO1Q9HAY6 547 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 HHATLQ9HCP6 504 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 UBQLN4Q9NRR5 601 aa8.02□□□□□ -1.13
SYNE2-209ENST00000553308 ALPK2Q86TB3 2170 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 NPIPA5A0A0B4J1W7 369 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GOLGA8QA0A0J9YX86 632 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 A0A1W2PQD3 144 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GOLGA8OA6NCC3 632 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 OR5H1A6NKK0 313 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GJE1A6NN92 205 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 NPIPA7E9PJI5 369 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GOLGA8NF8WBI6 632 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 H7C417 338 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GOLGA8RI6L899 631 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 SMAD9O15198 467 aaKnown RBP8.01□□□□□ -1.13
SYNE2-209ENST00000553308 RGS14O43566 566 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 RAD51DO75771 328 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 LY6HO94772 140 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 NPIPA8P0DM63 369 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 PYGBP11216 843 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GGT1P19440 569 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 IMPDH1P20839 514 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 ATP5F1P24539 256 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-209ENST00000553308 THBS2P35442 1172 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF83P51522 516 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 PRKAA2P54646 552 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 RAB35Q15286 201 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 TOMM34Q15785 309 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-209ENST00000553308 NDUFAF6Q330K2 333 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 NOXRED1Q6NXP6 359 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 SLC22A25Q6T423 547 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 IKBIPQ70UQ0 350 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 SLC43A2Q8N370 569 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 MUC15Q8N387 334 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 COX18Q8N8Q8 333 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 OR6Y1Q8NGX8 325 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 PHOSPHO1Q8TCT1 267 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 JADE3Q92613 823 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF524Q96C55 264 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 L3HYPDHQ96EM0 354 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 C16orf58Q96GQ5 468 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 DHRS9Q9BPW9 319 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GSTO2Q9H4Y5 243 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 L2HGDHQ9H9P8 463 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 MID1IP1Q9NPA3 183 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 GIN1Q9NXP7 522 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 KLHL9Q9P2J3 617 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF180Q9UJW8 692 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 POU2F3Q9UKI9 436 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 PYCARDQ9ULZ3 195 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 CARD8Q9Y2G2 431 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 STK38LQ9Y2H1 464 aa8.01□□□□□ -1.13
SYNE2-209ENST00000553308 A0A1W2PR80 420 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 KIF2AO00139 706 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 RSL1D1O76021 490 aaKnown RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 PGM3O95394 542 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 IGHV3-9P01782 118 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 ALOX5P09917 674 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 DHRS4L1P0CG22 281 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 PRKCAP17252 672 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 EFNA1P20827 205 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 USF1P22415 310 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 CD40P25942 277 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 SLC7A1P30825 629 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 LCN1P31025 176 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 FABP6P51161 128 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 P2RX1P51575 399 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 RAC3P60763 192 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 POU6F2P78424 691 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 LSM11P83369 360 aaKnown RBP eCLIP8□□□□□ -1.13
SYNE2-209ENST00000553308 RASGEF1BQ0VAM2 473 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 SELENBP1Q13228 472 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 EXOSC6Q5RKV6 272 aaKnown RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 FAM120AOSQ5T036 256 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 DDX59Q5T1V6 619 aaKnown RBP eCLIP8□□□□□ -1.13
SYNE2-209ENST00000553308 TMEM108Q6UXF1 575 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 RELL1Q8IUW5 271 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 SLC22A9Q8IVM8 553 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 FBXL14Q8N1E6 418 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF433Q8N7K0 673 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 CCNYL1Q8N7R7 359 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 OR52N5Q8NH56 324 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 CEP70Q8NHQ1 597 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 ZFP28Q8NHY6 868 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 FAM76AQ8TAV0 307 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF75CPQ92670 426 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 CDS1Q92903 461 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms