RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 GPR45Q9Y5Y3 372 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 ROS1P08922 2347 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 RAI1Q7Z5J4 1906 aaPredicted RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 H3BML4 177 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ANKRD28O15084 1053 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 UBDO15205 165 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 CFLARO15519 480 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 SEC14L5O43304 696 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 EDF1O60869 148 aaKnown RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 SHOX2O60902 331 aaPredicted RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 CLK3P49761 638 aaKnown RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 IDH3AP50213 366 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 NR1H2P55055 460 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 NME5P56597 212 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 UFM1P61960 85 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 PRR5P85299 388 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 PPP2R2BQ00005 443 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 C17orf67Q0P5P2 114 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF155Q12901 538 aaPredicted RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 CAPRIN1Q14444 709 aaKnown RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ZNHIT3Q15649 155 aaPredicted RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 GSTA3Q16772 222 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 DPY19L1Q2PZI1 675 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ANXA8L1Q5VT79 327 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ANKRD34AQ69YU3 496 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 STAC2Q6ZMT1 411 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 MARCH3Q86UD3 253 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 VPS37AQ8NEZ2 397 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 OR8J2Q8NGG1 315 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 OR6K3Q8NGY3 331 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 HOXB13Q92826 284 aaPredicted RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 TESCQ96BS2 214 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ZC3HAV1LQ96H79 300 aaKnown RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 GMPPAQ96IJ6 420 aaPredicted RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 ZBTB18Q99592 522 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 LMF2Q9BU23 707 aaKnown RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 KLHL4Q9C0H6 718 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 Q9N2J8 555 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 TCF7L2Q9NQB0 619 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 NTMQ9P121 344 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 MRTO4Q9UKD2 239 aaKnown RBP10.61□□□□□ -0.71
CKAP4-202ENST00000552828 PCDHGB4Q9UN71 923 aa10.61□□□□□ -0.71
CKAP4-202ENST00000552828 PRSS51A0A1B0GVH4 220 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 TTC36A6NLP5 189 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 E9PBE3 544 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 RNASET2O00584 256 aaKnown RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 ADAMDEC1O15204 470 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SS18L1O75177 396 aaPredicted RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SLC22A3O75751 556 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SOX30O94993 753 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 C6orf47O95873 294 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF17P17021 662 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 S100A3P33764 101 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SLC6A8P48029 635 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 PRKAG1P54619 331 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 PSMD4P55036 377 aaKnown RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 STX5Q13190 355 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 PDCD4Q53EL6 469 aaKnown RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 OR4F3Q6IEY1 312 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 APOOLQ6UXV4 268 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF704Q6ZNC4 412 aaPredicted RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 CXXC5Q7LFL8 322 aaKnown RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SZRD1Q7Z422 152 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF611Q8N823 705 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 GLB1L3Q8NCI6 653 aaPredicted RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 NUP43Q8NFH3 380 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 PSMA8Q8TAA3 256 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 TMEM171Q8WVE6 324 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 ADGRG7Q96K78 797 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 MS4A4EQ96PG1 132 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SIKE1Q9BRV8 207 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 CXorf56Q9H5V9 222 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 HHATLQ9HCP6 504 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 GLRX2Q9NS18 164 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 PAQR5Q9NXK6 330 aaPredicted RBP10.6□□□□□ -0.71
CKAP4-202ENST00000552828 STOML1Q9UBI4 398 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 SNX8Q9Y5X2 465 aa10.6□□□□□ -0.71
CKAP4-202ENST00000552828 A0A087WZY1 265 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 C7orf72A4D263 438 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 HS3ST1O14792 307 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 UTS2O95399 124 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 ANGPTL1O95841 491 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 NGFRP08138 427 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 PSMA4P25789 261 aaKnown RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 MDH1P40925 334 aaKnown RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 MAP3K8P41279 467 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 CCT3P49368 545 aaKnown RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 GYS2P54840 703 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 HBA1P69905 142 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 GUCY1A3Q02108 690 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 KRTAP1-1Q07627 177 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 SGCBQ16585 318 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 EXOC3L2Q2M3D2 409 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 CTU2Q2VPK5 515 aaKnown RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 FAM174BQ3ZCQ3 159 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 SPDYE7PQ495Y7 208 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms