RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 METTL25Q8N6Q8 603 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 FAM169BQ8N8A8 192 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 OR2V1Q8NHB1 315 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 AGR3Q8TD06 166 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 JADE3Q92613 823 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 OSTF1Q92882 214 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 C11orf24Q96F05 449 aaPredicted RBP6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 CHMP6Q96FZ7 201 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 C16orf45Q96MC5 204 aaPredicted RBP6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 ZFP3Q96NJ6 502 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 TSSK3Q96PN8 268 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF382Q96SR6 550 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 PIP5K1AQ99755 562 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 REG4Q9BYZ8 158 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 QRSL1Q9H0R6 528 aaKnown RBP6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 MIEF1Q9NQG6 463 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 PLSCR4Q9NRQ2 329 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 GIMAP4Q9NUV9 329 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 MED17Q9NVC6 651 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 ELOVL5Q9NYP7 299 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 NFU1Q9UMS0 254 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 CARD8Q9Y2G2 431 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 EMC9Q9Y3B6 208 aa6.08□□□□□ -1.44
PRPF40B-214ENST00000551320 NUP214P35658 2090 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 PLCE1Q9P212 2302 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 IGHV4-30-2A0A087WSY4 118 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 EXOC1LA0A1B0GW35 172 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF814B7Z6K7 855 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 G3V2L1 256 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SSX4O60224 188 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SS18L1O75177 396 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SEC22BO75396 215 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 GCM2O75603 506 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 KCNK2O95069 426 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 PSMG1O95456 288 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SYNGR4O95473 234 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 CRHP06850 196 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SNRPAP09012 282 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 H2AFB1P0C5Y9 115 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 H2AFB2P0C5Z0 115 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 LINC00032P0C843 101 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ATP5F1P24539 256 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 PSMA4P25789 261 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 AGTR1P30556 359 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ADMP35318 185 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 PRKAA2P54646 552 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 CARD18P57730 90 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 TRA2BP62995 288 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF117Q03924 483 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF763Q0D2J5 394 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 HEPACAMQ14CZ8 416 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 IMPG1Q17R60 797 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 PGGHGQ32M88 737 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 TMEM176BQ3YBM2 270 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 BEX5Q5H9J7 111 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 NKAPLQ5M9Q1 402 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 C9orf135Q5VTT2 229 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 LRIG3Q6UXM1 1119 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 WDR75Q8IWA0 830 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 C7orf57Q8NEG2 295 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 NUP43Q8NFH3 380 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 OR7A2PQ8NGA2 310 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 CDS1Q92903 461 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 GIMAP5Q96F15 307 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF300Q96RE9 604 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 FMO2Q99518 471 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 LMF2Q9BU23 707 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 C1QTNF3Q9BXJ4 246 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 STMN4Q9H169 189 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SLCO5A1Q9H2Y9 848 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 TUBB1Q9H4B7 451 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 CXorf36Q9H7Y0 433 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 PTGES2Q9H7Z7 377 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 Q9N2J8 555 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF701Q9NV72 531 aaPredicted RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 FAM120CQ9NX05 1096 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 NPAP1Q9NZP6 1156 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 SH3BP4Q9P0V3 963 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 MRPS18CQ9Y3D5 142 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF175Q9Y473 711 aa6.07□□□□□ -1.44
PRPF40B-214ENST00000551320 FAM234BA2RU67 622 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 PDPK1O15530 556 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 COQ9O75208 318 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 BCAS1O75363 584 aaPredicted RBP6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 SKAP2O75563 359 aaPredicted RBP6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 CRCPO75575 148 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 CYP7B1O75881 506 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 BCAS2O75934 225 aaPredicted RBP6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 SLITRK5O94991 958 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 SOX30O94993 753 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 NUDT14O95848 222 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 IGHA1P01876 353 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 SHBGP04278 402 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 DANCRP0C864 163 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 PRPS2P11908 318 aa6.06□□□□□ -1.44
PRPF40B-214ENST00000551320 SDC1P18827 310 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms