RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 HMBOX1Q6NT76 420 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 CBLN3Q6UW01 205 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 FCRLAQ7L513 359 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 MNS1Q8NEH6 495 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ATP6V1C2Q8NEY4 427 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 HSD17B8Q92506 261 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 KISS1RQ969F8 398 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF524Q96C55 264 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 FAM120BQ96EK7 910 aaKnown RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 IQCGQ9H095 443 aaKnown RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 TUBB1Q9H4B7 451 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 TIGARQ9NQ88 270 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 SIRT3Q9NTG7 399 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-205ENST00000550013 CARD8Q9Y2G2 431 aa13.68□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF814B7Z6K7 855 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 AZIN1O14977 448 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 ADAM11O75078 769 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 PRKD3O94806 890 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 TP53P04637 393 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 HMGN2P05204 90 aaKnown RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 YES1P07947 543 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 THBS1P07996 1170 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 LINC00032P0C843 101 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 ENPP1P22413 925 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 LASP1Q14847 261 aaKnown RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 RFTN2Q52LD8 501 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 ZCCHC12Q6PEW1 402 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 LRIG3Q6UXM1 1119 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 BHLHA15Q7RTS1 189 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 PIWIL2Q8TC59 973 aaKnown RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 TXLNGYQ9BZA5 131 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 TRIM2Q9C040 744 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 CXorf36Q9H7Y0 433 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 YAE1D1Q9NRH1 226 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 ZCCHC3Q9NUD5 404 aaKnown RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 OXSMQ9NWU1 459 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 GDF2Q9UK05 429 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 ING1Q9UK53 422 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-205ENST00000550013 ICAM5Q9UMF0 924 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 SNX8Q9Y5X2 465 aa13.67□□□□□ -0.22
RAB5C-205ENST00000550013 RNF212BA8MTL3 300 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 CD5LO43866 347 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 RAMP1O60894 148 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 CD8AP01732 235 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 CPA3P15088 417 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 EDNRAP25101 427 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 ITGADQ13349 1161 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 P2RY6Q15077 328 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 CCDC153Q494R4 210 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 GALNTL6Q49A17 601 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 KLHL26Q53HC5 615 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB5C-205ENST00000550013 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 DNM1P46Q6ZS02 220 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.66□□□□□ -0.22
RAB5C-205ENST00000550013 MTERF4Q7Z6M4 381 aaKnown RBP13.66□□□□□ -0.22
RAB5C-205ENST00000550013 TDRPQ86YL5 185 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 GPR119Q8TDV5 335 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 ZFP90Q8TF47 636 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 STACQ99469 402 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 TRAF4Q9BUZ4 470 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-205ENST00000550013 POTEKPQ9BYX7 375 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 PIGUQ9H490 435 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 GP6Q9HCN6 339 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 DUSP22Q9NRW4 184 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 PRSS50Q9UI38 385 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 KCNE3Q9Y6H6 103 aa13.66□□□□□ -0.22
RAB5C-205ENST00000550013 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 GJE1A6NN92 205 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 C9JVG2 144 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 LSM1O15116 133 aaKnown RBP13.65□□□□□ -0.22
RAB5C-205ENST00000550013 LYZL6O75951 148 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 HSPA4LO95757 839 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 NEFHP12036 1026 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 BCKDHAP12694 445 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 PRKCAP17252 672 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 PTNP21246 168 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 ATP6V1C1P21283 382 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 P2RX1P51575 399 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 STK11Q15831 433 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 LIPMQ5VYY2 423 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 Q6ZT83 130 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 C10orf107Q8IVU9 208 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 OR7A2PQ8NGA2 310 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-205ENST00000550013 HS6ST2Q96MM7 605 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 PSD2Q9BQI7 771 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 ANKZF1Q9H8Y5 726 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 GIMAP2Q9UG22 337 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 ACTL7BQ9Y614 415 aa13.65□□□□□ -0.22
RAB5C-205ENST00000550013 GPC6Q9Y625 555 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-205ENST00000550013 YLPM1P49750 1951 aaKnown RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 TMEM233B4DJY2 109 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 SHISA9B4DS77 424 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 KIF2AO00139 706 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 GTPBP1O00178 669 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms