RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 H6PDO95479 791 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 NUDT14O95848 222 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 IL18BPO95998 194 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 CHRM4P08173 479 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 PRKCAP17252 672 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 SSTR2P30874 369 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 SFTPDP35247 375 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 OPRM1P35372 400 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 KIR2DL2P43627 348 aaPredicted RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 EIF1AXP47813 144 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 KHKP50053 298 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 P2RX1P51575 399 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 CCR4P51679 360 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 ZNF41P51814 821 aaPredicted RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 POLR2JP52435 117 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 AQP5P55064 265 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 SF3B4Q15427 424 aaKnown RBP eCLIP8.78□□□□□ -13e-7■■■■□ 19.9
HDAC7-229ENST00000549883 DPY19L1Q2PZI1 675 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 TIGD2Q4W5G0 525 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 GPAT3Q53EU6 434 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 PPP4R4Q6NUP7 873 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 SLC2A7Q6PXP3 512 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 P4HA3Q7Z4N8 544 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 MTERF4Q7Z6M4 381 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 LURAP1LQ8IV03 231 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 TMCO5AQ8N6Q1 288 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 METTL25Q8N6Q8 603 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 ATP6V1C2Q8NEY4 427 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 VPS37AQ8NEZ2 397 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 LINC01560Q8TB33 94 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 ZFP90Q8TF47 636 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 CKAP2Q8WWK9 683 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 RNASE6Q93091 150 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 STARD4Q96DR4 205 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 ZBTB18Q99592 522 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 THUMPD3Q9BV44 507 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 SRXN1Q9BYN0 137 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 NMUR2Q9GZQ4 415 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 HOXD1Q9GZZ0 328 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 OPN3Q9H1Y3 402 aaPredicted RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 MCCC2Q9HCC0 563 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 SLC52A3Q9NQ40 469 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 TCF7L2Q9NQB0 619 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 INTS9Q9NV88 658 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 GALNT8Q9NY28 637 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 ZIM2Q9NZV7 527 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 CLEC4AQ9UMR7 237 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 WDR45Q9Y484 360 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 MYO9AB2RTY4 2548 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ANKHD1Q8IWZ3 2542 aaKnown RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 A0A087WZY1 265 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 C7orf72A4D263 438 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 RFXANKO14593 260 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ADAMDEC1O15204 470 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF264O43296 627 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 SMNDC1O75940 238 aaKnown RBP eCLIP8.77□□□□□ -1.013e-8■□□□□ 9.7
HDAC7-229ENST00000549883 NTN1O95631 604 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 IL6P05231 212 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 NUDT7P0C024 238 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 UBTFL6P0CB48 400 aaPredicted RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 UBL4AP11441 157 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ETFAP13804 333 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF17P17021 662 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 HOXB9P17482 250 aaPredicted RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 PGM1P36871 562 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 KIR2DL3P43628 341 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 RAC1P63000 192 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 SF3A3Q12874 501 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 FGFBP1Q14512 234 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 QPRTQ15274 297 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 GUSBP1Q15486 140 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 GSTA3Q16772 222 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 RPS26P11Q5JNZ5 115 aaPredicted RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF474Q6S9Z5 364 aaPredicted RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 CHMP1BQ7LBR1 199 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 MISPQ8IVT2 679 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 MSRB3Q8IXL7 192 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 LILRA2Q8N149 483 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF619Q8N2I2 560 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 C10orf111Q8N326 155 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 MIER2Q8N344 545 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 CNEP1R1Q8N9A8 125 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF527Q8NB42 609 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 GLB1L3Q8NCI6 653 aaPredicted RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 DYDC1Q8WWB3 177 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ROBO4Q8WZ75 1007 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 CNOT9Q92600 299 aaKnown RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZBTB8AQ96BR9 441 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 DNAJA3Q96EY1 480 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 ZNF559Q9BR84 538 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 SFXN3Q9BWM7 321 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 RBM24Q9BX46 236 aaKnown RBP8.77□□□□□ -1.01
HDAC7-229ENST00000549883 SLC38A1Q9H2H9 487 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 LIME1Q9H400 295 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 COQ10BQ9H8M1 238 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 RNF122Q9H9V4 155 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 EXD2Q9NVH0 621 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 SLC25A37Q9NYZ2 338 aa8.77□□□□□ -1.01
HDAC7-229ENST00000549883 SLAMF8Q9P0V8 285 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms