RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ULK3Q6PHR2 472 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DNAJA4Q8WW22 397 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ZC3H10Q96K80 434 aaKnown RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 OR5M11Q96RB7 305 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DDOQ99489 341 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ELF4Q99607 663 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ARHGAP9Q9BRR9 750 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TMEM27Q9HBJ8 222 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 HMG20AQ9NP66 347 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 MEPEQ9NQ76 525 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TVP23BQ9NYZ1 205 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 SIT1Q9Y3P8 196 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ATG2BQ96BY7 2078 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 PCDH15Q96QU1 1955 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ADAMTS9Q9P2N4 1935 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 A0A087WUJ7 227 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 A0A1B0GTQ1 180 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 SERINC4A6NH21 518 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TLX2O43763 284 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TNNI3P19429 210 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 MAKP20794 623 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ID2Q02363 134 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 STX4Q12846 297 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 GPR68Q15743 365 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DEFB110Q30KQ9 67 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ZNF362Q5T0B9 420 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 RABEPKQ7Z6M1 372 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 SLCO6A1Q86UG4 719 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 PEX11GQ96HA9 241 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 ART5Q96L15 291 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 WDFY2Q96P53 400 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 CDADC1Q9BWV3 514 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 SEMA4CQ9C0C4 833 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 MKKSQ9NPJ1 570 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 HCN3Q9P1Z3 774 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 STUB1Q9UNE7 303 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 CDH23Q9H251 3354 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 IDH3BO43837 385 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 APEHP13798 732 aaKnown RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 EPHA8P29322 1005 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 OPRL1P41146 370 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 MTNR1AP48039 350 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 GPR143P51810 404 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 WNT4P56705 351 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 VBP1P61758 197 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 NCS1P62166 190 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 SLC13A2Q13183 592 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TMEM71Q6P5X7 295 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 BPHLQ86WA6 291 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 SLC15A4Q8N697 577 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 PSD4Q8NDX1 1056 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 OR4C6Q8NH72 309 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 OR1L3Q8NH93 324 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 OR14A16Q8NHC5 309 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 CNOT9Q92600 299 aaKnown RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 KISS1RQ969F8 398 aaPredicted RBP9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TGM7Q96PF1 710 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 IL4I1Q96RQ9 567 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DCSTAMPQ9H295 470 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 TBC1D23Q9NUY8 699 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 IL20RAQ9UHF4 553 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 DTX4Q9Y2E6 619 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 NTNG1Q9Y2I2 539 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 MED31Q9Y3C7 131 aa9.2□□□□□ -0.94
RAB5B-206ENST00000549505 C5orf42Q9H799 3197 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 A0A1B0GWA3 101 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 CCDC182A6NF36 153 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 ZNF670-ZNF695F2Z2N8 137 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 M0R129 80 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 IMPA2O14732 288 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 FRS3O43559 492 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 PIP5K1CO60331 668 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 HCN1O60741 890 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 ADAM11O75078 769 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 PPM1BO75688 479 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 LIMS3P0CW19 117 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 LIMS4P0CW20 117 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 GNSP15586 552 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 BTG2P78543 158 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 SNAPC1Q16533 368 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 PLK5Q496M5 336 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 SMARCD3Q6STE5 483 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 CCDC81Q6ZN84 652 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 PHC2Q8IXK0 858 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 IQCF1Q8N6M8 205 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 SAP25Q8TEE9 199 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 ZHX1-C8orf76Q96EF9 292 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 CNIH4Q9P003 139 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 SUSD2Q9UGT4 822 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 SRPK3Q9UPE1 567 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 TRAPPC4Q9Y296 219 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 ADAM10O14672 748 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 POLR1CO15160 346 aaPredicted RBP9.19□□□□□ -0.94
RAB5B-206ENST00000549505 POU1F1P28069 291 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 SSTR4P31391 388 aa9.19□□□□□ -0.94
RAB5B-206ENST00000549505 ETV5P41161 510 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms