RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 BBS10Q8TAM1 723 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 GPR119Q8TDV5 335 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 OIT3Q8WWZ8 545 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 RELTQ969Z4 430 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 ZNF607Q96SK3 696 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 HOPXQ9BPY8 73 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-205ENST00000549034 KLHDC3Q9BQ90 382 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 PIGQQ9BRB3 760 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 TMEM38AQ9H6F2 299 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 ARMC7Q9H6L4 198 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 BCL2L10Q9HD36 194 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 MED17Q9NVC6 651 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 TAGLN3Q9UI15 199 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 TINAGQ9UJW2 476 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 CAMK2AQ9UQM7 478 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 SLC5A6Q9Y289 635 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 SLC35A3Q9Y2D2 325 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 IFT52Q9Y366 437 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 ZNF337Q9Y3M9 751 aa8.7□□□□□ -1.02
RAB5B-205ENST00000549034 NBASA2RRP1 2371 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 OR2M5A3KFT3 312 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 AHRRA9YTQ3 701 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 H3BML4 177 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 LINC01387J3KSC0 135 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 M0QX08 132 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 BCAS1O75363 584 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 SERPINB7O75635 380 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 AGFG2O95081 481 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 OPN1LWP04000 364 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 LINGO3P0C6S8 592 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PABPC4LP0CB38 370 aaKnown RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PEPDP12955 493 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PGCP20142 388 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 CHMP24386 653 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 AQP1P29972 269 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 NUDT2P50583 147 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 GZMMP51124 257 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 GFRA1P56159 465 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 B3GALT5-AS1P59052 145 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 CRYZQ08257 329 aaKnown RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 RBBP4Q09028 425 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 TOMM34Q15785 309 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 LIN52Q52LA3 116 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 C4orf17Q53FE4 359 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 NHSL2Q5HYW2 709 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 EMC4Q5J8M3 183 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 MRPL2Q5T653 305 aaKnown RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PRAMEF8Q5VWM4 474 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PRAMEF7Q5VXH5 474 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 CHMP1BQ7LBR1 199 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 KRT73Q86Y46 540 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PTOV1Q86YD1 416 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 CMIPQ8IY22 773 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 PM20D2Q8IYS1 436 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 EID3Q8N140 333 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 CLIP4Q8N3C7 705 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 FITM2Q8N6M3 262 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 C11orf65Q8NCR3 313 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 HIPK4Q8NE63 616 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 ATP6V1C2Q8NEY4 427 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 FBXO27Q8NI29 283 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 CNOT9Q92600 299 aaKnown RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 WDYHV1Q96HA8 205 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 NSL1Q96IY1 281 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 ZNF583Q96ND8 569 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 NPAS1Q99742 590 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 SPATA5L1Q9BVQ7 753 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 TP63Q9H3D4 680 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 ARL8BQ9NVJ2 186 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 RLIMQ9NVW2 624 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 STOML1Q9UBI4 398 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 ANGPT4Q9Y264 503 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 ZNF443Q9Y2A4 671 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-205ENST00000549034 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
RAB5B-205ENST00000549034 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 CCT8L1PA6NM43 557 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 FXYD1O00168 92 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 THBS1P07996 1170 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 GKN3PP0CG01 181 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 NID1P14543 1247 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 GABRA1P14867 456 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 ETS2P15036 469 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 CPN1P15169 458 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 POU3F2P20265 443 aaPredicted RBP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 RPS4Y1P22090 263 aaKnown RBP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 ACVR2AP27037 513 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 EIF1P41567 113 aaKnown RBP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 SLC6A8P48029 635 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 SUMO3P55854 103 aaPredicted RBP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 SESN3P58005 492 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 PSME3P61289 254 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 EEF1A1P68104 462 aaKnown RBP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 MXRA7P84157 204 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 SRSF1Q07955 248 aaKnown RBP eCLIP8.68□□□□□ -1.02
RAB5B-205ENST00000549034 PMPCAQ10713 525 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 SKP2Q13309 424 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 QPRTQ15274 297 aa8.68□□□□□ -1.02
RAB5B-205ENST00000549034 SF3B4Q15427 424 aaKnown RBP eCLIP8.68□□□□□ -1.021e-6■■■■■ 31.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms