RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 NFATC1O95644 943 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 SNRPBP14678 240 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 ENPP1P22413 925 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 GALP22466 123 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 F8A1P23610 371 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 BDH1Q02338 343 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 ID2Q02363 134 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 SDE2Q6IQ49 451 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 SIAH3Q8IW03 269 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR52L1Q8NGH7 329 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR5J2Q8NH18 312 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 DACT3Q96B18 629 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 IFT27Q9BW83 186 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 WDR26Q9H7D7 661 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 FBXO34Q9NWN3 711 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 ACSL5Q9ULC5 683 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 TRAV27A0A087WT01 109 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 SCO1O75880 301 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TCRBP04435 133 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 SSTR2P30874 369 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 DRD3P35462 400 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 SOX9P48436 509 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 SSX6Q7RTT6 188 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 SUSD6Q92537 303 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 CLIP3Q96DZ5 547 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 GPR137Q96N19 417 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 CD180Q99467 661 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TEAD3Q99594 435 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR51J1Q9H342 316 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 SERGEFQ9UGK8 458 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 U3KQ87 197 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 CDHR4A6H8M9 788 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TBC1D3BA6NDS4 549 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 MID1O15344 667 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 MT-ND5P03915 603 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 IRF4Q15306 451 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRSS45Q7RTY3 260 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TOMM5Q8N4H5 51 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF680Q8NEM1 530 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR51A7Q8NH64 312 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 BRIX1Q8TDN6 353 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 HS6ST2Q96MM7 605 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 NDC1Q9BTX1 674 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 DPAGT1Q9H3H5 408 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 CCDC86Q9H6F5 360 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 NARFLQ9H6Q4 476 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 TMEM74BQ9NUR3 256 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 CLDND1Q9NY35 253 aa13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF223Q9UK11 482 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-218ENST00000548919 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 C7orf66A4D0T2 115 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PEX12O00623 359 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 SLC22A5O76082 557 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 MT-ND4P03905 459 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 ANKRD34CP0C6C1 535 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF888P0CJ79 500 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 BMP7P18075 431 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PYCR1P32322 319 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 FOXK2Q01167 660 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 FGL2Q14314 439 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 NRROSQ86YC3 692 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 TTC9Q92623 222 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 GHSRQ92847 366 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 C1QTNF3-AMACRE9PGA6 284 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PLPP2O43688 288 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 SAGP10523 405 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 EEF1A1P68104 462 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF85Q03923 595 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 POU4F3Q15319 338 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 POF1BQ8WVV4 589 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PGLYRP3Q96LB9 341 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 TEX101Q9BY14 249 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 B3GNT2Q9NY97 397 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms