RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 METTL25Q8N6Q8 603 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 OR4D11Q8NGI4 311 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 OR4C3Q8NH37 302 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 OR52P1PQ8NH57 321 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 HGDQ93099 445 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 NODALQ96S42 347 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 RTN4RQ9BZR6 473 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 SAP130Q9H0E3 1048 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 SDHAF3Q9NRP4 125 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 CALML5Q9NZT1 146 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 ERRFI1Q9UJM3 462 aaPredicted RBP10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 AURKCQ9UQB9 309 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 ZNF443Q9Y2A4 671 aaPredicted RBP10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 CHST2Q9Y4C5 530 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 HRH3Q9Y5N1 445 aa10.68□□□□□ -0.7
TUBA1C-203ENST00000548470 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 TRGV8A0A0C4DH27 118 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 PINLYPA6NC86 204 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 AGAP5A6NIR3 686 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 AQP12BA6NM10 295 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 H3BNX3 289 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 hCG_2039718K7EN88 272 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 M0R3H8 397 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 CCL21O00585 134 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 AQP7O14520 342 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 SCO2O43819 266 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 CBR3O75828 277 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 PDE9AO76083 593 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 OXSR1O95747 527 aaPredicted RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 PABPC4LP0CB38 370 aaKnown RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 ETS2P15036 469 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 AGAP20933 346 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 OR1E2P47887 323 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 MASP1P48740 699 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 GNA13Q14344 377 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 SF3B4Q15427 424 aaKnown RBP eCLIP10.67□□□□□ -0.72e-9■■■□□ 16.5
TUBA1C-203ENST00000548470 DUSP7Q16829 419 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 PRAMEF8Q5VWM4 474 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 PRAMEF7Q5VXH5 474 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 TIGD3Q6B0B8 471 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 TMEM211Q6ICI0 200 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 APOOLQ6UXV4 268 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 RPTNQ6XPR3 784 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 EIF3MQ7L2H7 374 aaKnown RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 KRT73Q86Y46 540 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 AQP12AQ8IXF9 295 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 CLIP4Q8N3C7 705 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 FAM57AQ8TBR7 257 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 SARAFQ96BY9 339 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 SLC47A1Q96FL8 570 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 KLHDC3Q9BQ90 382 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 DEFB127Q9H1M4 99 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 TSPAN10Q9H1Z9 355 aaPredicted RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 LDAHQ9H6V9 325 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 RLIMQ9NVW2 624 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 ABCG2Q9UNQ0 655 aa10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 MRPS18CQ9Y3D5 142 aaKnown RBP10.67□□□□□ -0.7
TUBA1C-203ENST00000548470 TRGV5A0A0B4J1U4 118 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 A0A1B0GTH9 108 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 FAM166BA8MTA8 275 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 E9PLN8 166 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 G3V3Y1 287 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 CDC40O60508 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 TIPRLO75663 272 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 WISP2O76076 250 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 SEMG1P04279 462 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 HPNP05981 417 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 RFC3P40938 356 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 MAGEA5P43359 124 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 KCNJ5P48544 419 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 SMSP52788 366 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 ATP12AP54707 1039 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 EEF1A1P68104 462 aaKnown RBP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 KCNJ10P78508 379 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 HOXC5Q00444 222 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 CD226Q15762 336 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 MTX3Q5HYI7 312 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 ZNF311Q5JNZ3 666 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 MRPL2Q5T653 305 aaKnown RBP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 PRAMEF20Q5VT98 475 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 C1QL3Q5VWW1 255 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 XKRXQ6PP77 449 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 TRILQ7L0X0 811 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 TSEN54Q7Z6J9 526 aaKnown RBP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 MARCH3Q86UD3 253 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 FJX1Q86VR8 437 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 DOLPP1Q86YN1 238 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 CHERPQ8IWX8 916 aaKnown RBP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 PEX5LQ8IYB4 626 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 OR1J4Q8NGS1 313 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 PHF10Q8WUB8 498 aaKnown RBP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 RNF138Q8WVD3 245 aa10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 CNOT9Q92600 299 aaKnown RBP10.66□□□□□ -0.7
TUBA1C-203ENST00000548470 PYURFQ96I23 114 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms