RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	OR2C1	O95371	312 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	C9	P02748	559 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CCDC159	P0C7I6	412 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	EPB41	P11171	864 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	RPS2	P15880	293 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	AK4	P27144	223 aa	Predicted RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TEAD1	P28347	426 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	GJB2	P29033	226 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC15A1	P46059	708 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	RPL34	P49207	117 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CAPZA1	P52907	286 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	RHOA	P61586	193 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ARF5	P84085	180 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	HTD2	P86397	168 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	PAX8	Q06710	450 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CALCOCO2	Q13137	446 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	NME3	Q13232	169 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMED1	Q13445	227 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	EIF4EBP2	Q13542	120 aa	Predicted RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SNTB1	Q13884	538 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	KBTBD12	Q3ZCT8	623 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CES4A	Q5XG92	561 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ACSM2B	Q68CK6	577 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	IRGC	Q6NXR0	463 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMEM270	Q6UE05	265 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	FIP1L1	Q6UN15	594 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	LINC00696	Q6ZRV3	163 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	OTOA	Q7RTW8	1153 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	PRSS42	Q7Z5A4	293 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ZER1	Q7Z7L7	766 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMEM110	Q86TL2	294 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ADCK1	Q86TW2	530 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMEM126B	Q8IUX1	230 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SIDT2	Q8NBJ9	832 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	IPMK	Q8NFU5	416 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	NEK11	Q8NG66	645 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	OR52K2	Q8NGK3	314 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	MIPOL1	Q8TD10	442 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC37A2	Q8TED4	501 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	EEF2KMT	Q96G04	330 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	PGAM5	Q96HS1	289 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ELMO2	Q96JJ3	720 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	FAM81B	Q96LP2	452 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TGM7	Q96PF1	710 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SECISBP2	Q96T21	854 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	KRT12	Q99456	494 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC7A5P2	Q9GIP4	190 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	WWTR1	Q9GZV5	400 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CXXC4	Q9H2H0	198 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SUDS3	Q9H7L9	328 aa	Predicted RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	FGF21	Q9NSA1	209 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	EXOC1	Q9NV70	894 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ANO10	Q9NW15	660 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TAS2R3	Q9NYW6	316 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	FETUB	Q9UGM5	382 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	OSGIN1	Q9UJX0	560 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	EXO1	Q9UQ84	846 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	TRAF3IP3	Q9Y228	551 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	LIPT1	Q9Y234	373 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC17A4	Q9Y2C5	497 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	JMJD1C	Q15652	2540 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	ACAN	P16112	2415 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	PCM1	Q15154	2024 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	INTS1	Q8N201	2190 aa	Known RBP	2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	DOCK10	Q96BY6	2186 aa		2.9	□□□□□ -1.95
RPAP3-205	ENST00000548211	CSMD2	Q7Z408	3487 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	NCOA6	Q14686	2063 aa	Predicted RBP	2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	GTF3C1	Q12789	2109 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	LOC100509620	A0A075B734	347 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211		A0A0U1RQS6	177 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	TRBC2	A0A5B9	178 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	ERICH4	A6NGS2	130 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	KLLN	B2CW77	178 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	IDS	B3KWA1	339 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	PSMD11	O00231	422 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	PES1	O00541	588 aa	Known RBP	2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	E2F3	O00716	465 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	CETN3	O15182	167 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	BCL2L11	O43521	198 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	BUB1	O43683	1085 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	KDELR3	O43731	214 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	GPC4	O75487	556 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	SCRG1	O75711	98 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	ZWINT	O95229	277 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	JCHAIN	P01591	159 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	HBQ1	P09105	142 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	F3	P13726	295 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	NELFE	P18615	380 aa	Known RBP	2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	IL10	P22301	178 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	IDS	P22304	550 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	DNASE1	P24855	282 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	CA7	P43166	264 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	GPR1	P46091	355 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	GSC	P56915	257 aa	Predicted RBP	2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	CDK3	Q00526	305 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	NPRL3	Q12980	569 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	STK38	Q15208	465 aa		2.89	□□□□□ -1.95
RPAP3-205	ENST00000548211	C15orf59	Q2T9L4	293 aa	Predicted RBP	2.89	□□□□□ -1.95

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